RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 JCADQ9P266 1359 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 PPM1GO15355 546 aaPredicted RBP10.29□□□□□ -0.76
PCNX4-211ENST00000555929 ANP32CO43423 234 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 ADAMTS2O95450 1211 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 GCP02774 474 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
PCNX4-211ENST00000555929 PROM2Q8N271 834 aa10.29□□□□□ -0.76
PCNX4-211ENST00000555929 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
PCNX4-211ENST00000555929 MEX3CQ5U5Q3 659 aaKnown RBP10.28□□□□□ -0.76
PCNX4-211ENST00000555929 KCNH5Q8NCM2 988 aa10.28□□□□□ -0.76
PCNX4-211ENST00000555929 NHSL1Q5SYE7 1610 aa10.28□□□□□ -0.76
PCNX4-211ENST00000555929 RRS1Q15050 365 aaKnown RBP10.27□□□□□ -0.77
PCNX4-211ENST00000555929 NSD2O96028 1365 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 AMPHP49418 695 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
PCNX4-211ENST00000555929 CHRNA2Q15822 529 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 PRDM11Q9NQV5 511 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
PCNX4-211ENST00000555929 COL16A1Q07092 1604 aaPredicted RBP10.25□□□□□ -0.77
PCNX4-211ENST00000555929 RALBP1Q15311 655 aa10.25□□□□□ -0.77
PCNX4-211ENST00000555929 EMILIN1Q9Y6C2 1016 aa10.25□□□□□ -0.77
PCNX4-211ENST00000555929 USP19O94966 1318 aa10.25□□□□□ -0.77
PCNX4-211ENST00000555929 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
PCNX4-211ENST00000555929 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
PCNX4-211ENST00000555929 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
PCNX4-211ENST00000555929 C8orf37Q96NL8 207 aa10.24□□□□□ -0.77
PCNX4-211ENST00000555929 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
PCNX4-211ENST00000555929 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
PCNX4-211ENST00000555929 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
PCNX4-211ENST00000555929 FAM83GA6ND36 823 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 GALR2O43603 387 aaPredicted RBP10.23□□□□□ -0.77
PCNX4-211ENST00000555929 LTV1Q96GA3 475 aaPredicted RBP10.23□□□□□ -0.77
PCNX4-211ENST00000555929 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 PHF12Q96QT6 1004 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 KIAA0232Q92628 1395 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 NPC1L1Q9UHC9 1359 aa10.23□□□□□ -0.77
PCNX4-211ENST00000555929 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 PPP2R1AP30153 589 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 MTHFSP49914 203 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 ARHGEF25Q86VW2 580 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
PCNX4-211ENST00000555929 MED1Q15648 1581 aaPredicted RBP10.22□□□□□ -0.77
PCNX4-211ENST00000555929 CSB-PGBD3P0DP91 1061 aa10.21□□□□□ -0.77
PCNX4-211ENST00000555929 EVA1CP58658 441 aa10.21□□□□□ -0.77
PCNX4-211ENST00000555929 STRN4Q9NRL3 753 aa10.21□□□□□ -0.77
PCNX4-211ENST00000555929 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
PCNX4-211ENST00000555929 ALS2Q96Q42 1657 aa10.21□□□□□ -0.78
PCNX4-211ENST00000555929 HOXC9P31274 260 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 IP6K1Q92551 441 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 MYBBP1AQ9BQG0 1328 aaKnown RBP10.2□□□□□ -0.78
PCNX4-211ENST00000555929 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 AXIN2Q9Y2T1 843 aa10.2□□□□□ -0.78
PCNX4-211ENST00000555929 AATKQ6ZMQ8 1374 aa10.19□□□□□ -0.78
PCNX4-211ENST00000555929 MIER1Q8N108 512 aa10.19□□□□□ -0.78
PCNX4-211ENST00000555929 CCDC9Q9Y3X0 531 aaKnown RBP10.19□□□□□ -0.78
PCNX4-211ENST00000555929 KIF20BQ96Q89 1820 aa10.19□□□□□ -0.78
PCNX4-211ENST00000555929 SLIT3O75094 1523 aa10.18□□□□□ -0.78
PCNX4-211ENST00000555929 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
PCNX4-211ENST00000555929 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
PCNX4-211ENST00000555929 LRP6O75581 1613 aa10.18□□□□□ -0.78
PCNX4-211ENST00000555929 CPDO75976 1380 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 FLT4P35916 1363 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 AFF2P51816 1311 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
PCNX4-211ENST00000555929 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 USP21Q9UK80 565 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 NFAT5O94916 1531 aa10.17□□□□□ -0.78
PCNX4-211ENST00000555929 SHPRHQ149N8 1683 aa10.16□□□□□ -0.78
PCNX4-211ENST00000555929 COL22A1Q8NFW1 1626 aaPredicted RBP10.16□□□□□ -0.78
PCNX4-211ENST00000555929 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
PCNX4-211ENST00000555929 TOM1L2Q6ZVM7 507 aa10.16□□□□□ -0.78
PCNX4-211ENST00000555929 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
PCNX4-211ENST00000555929 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
PCNX4-211ENST00000555929 CCDC184Q52MB2 194 aa10.15□□□□□ -0.78
PCNX4-211ENST00000555929 LARP1Q6PKG0 1096 aaKnown RBP10.15□□□□□ -0.78
PCNX4-211ENST00000555929 UNC5CLQ8IV45 518 aa10.15□□□□□ -0.78
PCNX4-211ENST00000555929 USHBP1Q8N6Y0 703 aa10.15□□□□□ -0.78
PCNX4-211ENST00000555929 TSPYL2Q9H2G4 693 aaPredicted RBP10.15□□□□□ -0.78
PCNX4-211ENST00000555929 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
PCNX4-211ENST00000555929 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.79
PCNX4-211ENST00000555929 RTL1A6NKG5 1358 aa10.14□□□□□ -0.79
PCNX4-211ENST00000555929 QTRT2Q9H974 415 aaKnown RBP10.14□□□□□ -0.79
PCNX4-211ENST00000555929 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
PCNX4-211ENST00000555929 INSRP06213 1382 aa10.14□□□□□ -0.79
PCNX4-211ENST00000555929 U2AF1L5P0DN76 240 aaPredicted RBP10.13□□□□□ -0.79
PCNX4-211ENST00000555929 IL13P35225 146 aa10.13□□□□□ -0.79
PCNX4-211ENST00000555929 U2AF1Q01081 240 aaKnown RBP eCLIP10.13□□□□□ -0.79
PCNX4-211ENST00000555929 WDR43Q15061 677 aaKnown RBP eCLIP10.13□□□□□ -0.79
PCNX4-211ENST00000555929 NBPF6Q5VWK0 638 aa10.13□□□□□ -0.79
PCNX4-211ENST00000555929 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
PCNX4-211ENST00000555929 NBPF4Q96M43 638 aa10.13□□□□□ -0.79
PCNX4-211ENST00000555929 MARF1Q9Y4F3 1742 aaKnown RBP10.13□□□□□ -0.79
PCNX4-211ENST00000555929 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms