RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 SULT6B1Q6IMI4 303 aa23.87■■□□□ 1.41
GABRB3-209ENST00000555632 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
GABRB3-209ENST00000555632 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
GABRB3-209ENST00000555632 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
GABRB3-209ENST00000555632 IL16Q14005 1332 aa23.86■■□□□ 1.41
GABRB3-209ENST00000555632 TNNQ9UQP3 1299 aa23.86■■□□□ 1.41
GABRB3-209ENST00000555632 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
GABRB3-209ENST00000555632 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
GABRB3-209ENST00000555632 HSPA2P54652 639 aa23.84■■□□□ 1.41
GABRB3-209ENST00000555632 PANK1Q8TE04 598 aa23.84■■□□□ 1.41
GABRB3-209ENST00000555632 DLG5Q8TDM6 1919 aa23.83■■□□□ 1.41
GABRB3-209ENST00000555632 FAM83GA6ND36 823 aa23.83■■□□□ 1.41
GABRB3-209ENST00000555632 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
GABRB3-209ENST00000555632 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.4
GABRB3-209ENST00000555632 LAS1LQ9Y4W2 734 aaKnown RBP23.83■■□□□ 1.4
GABRB3-209ENST00000555632 SBNO1A3KN83 1393 aa23.82■■□□□ 1.4
GABRB3-209ENST00000555632 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
GABRB3-209ENST00000555632 FLT4P35916 1363 aa23.81■■□□□ 1.4
GABRB3-209ENST00000555632 AMPHP49418 695 aa23.81■■□□□ 1.4
GABRB3-209ENST00000555632 XPCQ01831 940 aaPredicted RBP23.8■■□□□ 1.4
GABRB3-209ENST00000555632 DCTN1Q14203 1278 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 COG6Q9Y2V7 657 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 RLBP1P12271 317 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 PSME1Q06323 249 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 SKAP1Q86WV1 359 aa23.8■■□□□ 1.4
GABRB3-209ENST00000555632 FOXO3O43524 673 aa23.79■■□□□ 1.4
GABRB3-209ENST00000555632 SSH1Q8WYL5 1049 aa23.77■■□□□ 1.4
GABRB3-209ENST00000555632 CLUAP1Q96AJ1 413 aa23.77■■□□□ 1.4
GABRB3-209ENST00000555632 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
GABRB3-209ENST00000555632 HOXC9P31274 260 aa23.76■■□□□ 1.39
GABRB3-209ENST00000555632 EYA1Q99502 592 aa23.76■■□□□ 1.39
GABRB3-209ENST00000555632 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
GABRB3-209ENST00000555632 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
GABRB3-209ENST00000555632 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
GABRB3-209ENST00000555632 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
GABRB3-209ENST00000555632 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
GABRB3-209ENST00000555632 ZNF853P0CG23 659 aa23.73■■□□□ 1.39
GABRB3-209ENST00000555632 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
GABRB3-209ENST00000555632 MBIPQ9NS73 344 aa23.73■■□□□ 1.39
GABRB3-209ENST00000555632 ARHGEF10O15013 1369 aa23.73■■□□□ 1.39
GABRB3-209ENST00000555632 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
GABRB3-209ENST00000555632 IFT57Q9NWB7 429 aa23.72■■□□□ 1.39
GABRB3-209ENST00000555632 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
GABRB3-209ENST00000555632 IGSF1Q8N6C5 1336 aa23.71■■□□□ 1.39
GABRB3-209ENST00000555632 TSPYL6Q8N831 410 aa23.71■■□□□ 1.39
GABRB3-209ENST00000555632 LTV1Q96GA3 475 aaPredicted RBP23.71■■□□□ 1.39
GABRB3-209ENST00000555632 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
GABRB3-209ENST00000555632 KDRP35968 1356 aa23.7■■□□□ 1.38
GABRB3-209ENST00000555632 GNAI1P63096 354 aa23.7■■□□□ 1.38
GABRB3-209ENST00000555632 LMOD3Q0VAK6 560 aa23.7■■□□□ 1.38
GABRB3-209ENST00000555632 MCM10Q7L590 875 aa23.7■■□□□ 1.38
GABRB3-209ENST00000555632 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
GABRB3-209ENST00000555632 CALD1Q05682 793 aaKnown RBP23.69■■□□□ 1.38
GABRB3-209ENST00000555632 CFAP44Q96MT7 982 aa23.69■■□□□ 1.38
GABRB3-209ENST00000555632 MTHFSDQ2M296 383 aaKnown RBP23.68■■□□□ 1.38
GABRB3-209ENST00000555632 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
GABRB3-209ENST00000555632 LTN1O94822 1766 aa23.68■■□□□ 1.38
GABRB3-209ENST00000555632 NFAT5O94916 1531 aa23.68■■□□□ 1.38
GABRB3-209ENST00000555632 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
GABRB3-209ENST00000555632 TRIM27P14373 513 aa23.67■■□□□ 1.38
GABRB3-209ENST00000555632 KIF24Q5T7B8 1368 aa23.67■■□□□ 1.38
GABRB3-209ENST00000555632 VAMP4O75379 141 aa23.66■■□□□ 1.38
GABRB3-209ENST00000555632 CENPQQ7L2Z9 268 aaPredicted RBP23.66■■□□□ 1.38
GABRB3-209ENST00000555632 IGHDP01880 384 aa23.66■■□□□ 1.38
GABRB3-209ENST00000555632 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
GABRB3-209ENST00000555632 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
GABRB3-209ENST00000555632 C8orf58Q8NAV2 365 aa23.65■■□□□ 1.38
GABRB3-209ENST00000555632 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
GABRB3-209ENST00000555632 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
GABRB3-209ENST00000555632 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
GABRB3-209ENST00000555632 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
GABRB3-209ENST00000555632 LMTK3Q96Q04 1460 aa23.63■■□□□ 1.37
GABRB3-209ENST00000555632 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
GABRB3-209ENST00000555632 ATF3P18847 181 aa23.63■■□□□ 1.37
GABRB3-209ENST00000555632 MST1RQ04912 1400 aa23.63■■□□□ 1.37
GABRB3-209ENST00000555632 ATF7IPQ6VMQ6 1270 aa23.62■■□□□ 1.37
GABRB3-209ENST00000555632 FTSJ3Q8IY81 847 aaKnown RBP23.62■■□□□ 1.37
GABRB3-209ENST00000555632 IP6K1Q92551 441 aa23.62■■□□□ 1.37
GABRB3-209ENST00000555632 GCP02774 474 aa23.62■■□□□ 1.37
GABRB3-209ENST00000555632 MVPQ14764 893 aaKnown RBP23.62■■□□□ 1.37
GABRB3-209ENST00000555632 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
GABRB3-209ENST00000555632 ALDH1L2Q3SY69 923 aa23.62■■□□□ 1.37
GABRB3-209ENST00000555632 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
GABRB3-209ENST00000555632 PCDHB15Q9Y5E8 787 aa23.61■■□□□ 1.37
GABRB3-209ENST00000555632 RTL1A6NKG5 1358 aa23.61■■□□□ 1.37
GABRB3-209ENST00000555632 TWISTNBQ3B726 338 aaPredicted RBP23.6■■□□□ 1.37
GABRB3-209ENST00000555632 KCNH5Q8NCM2 988 aa23.6■■□□□ 1.37
GABRB3-209ENST00000555632 CHL1O00533 1208 aa23.59■■□□□ 1.37
GABRB3-209ENST00000555632 MIS18AQ9NYP9 233 aa23.59■■□□□ 1.37
GABRB3-209ENST00000555632 CRB1P82279 1406 aa23.58■■□□□ 1.37
GABRB3-209ENST00000555632 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
GABRB3-209ENST00000555632 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
GABRB3-209ENST00000555632 STRCQ7RTU9 1775 aa23.58■■□□□ 1.37
GABRB3-209ENST00000555632 KIF16BQ96L93 1317 aa23.57■■□□□ 1.36
GABRB3-209ENST00000555632 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
GABRB3-209ENST00000555632 MRPL50Q8N5N7 158 aaKnown RBP23.57■■□□□ 1.36
GABRB3-209ENST00000555632 ARHGEF25Q86VW2 580 aa23.56■■□□□ 1.36
GABRB3-209ENST00000555632 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
GABRB3-209ENST00000555632 ZNF428Q96B54 188 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms