RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 SBNO1A3KN83 1393 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 RGPD2P0DJD1 1756 aa8.71□□□□□ -1.02
PRKCH-214ENST00000555233 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 ATF3P18847 181 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 CARD14Q9BXL6 1004 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 CCDC61Q9Y6R9 512 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 NWD2Q9ULI1 1742 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 ACEP12821 1306 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 NINLQ9Y2I6 1382 aa8.7□□□□□ -1.02
PRKCH-214ENST00000555233 RIOK3O14730 519 aaKnown RBP8.69□□□□□ -1.02
PRKCH-214ENST00000555233 TOM1O60784 492 aa8.69□□□□□ -1.02
PRKCH-214ENST00000555233 SLC12A5Q9H2X9 1139 aa8.69□□□□□ -1.02
PRKCH-214ENST00000555233 USP19O94966 1318 aa8.69□□□□□ -1.02
PRKCH-214ENST00000555233 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
PRKCH-214ENST00000555233 EDC4Q6P2E9 1401 aaKnown RBP8.69□□□□□ -1.02
PRKCH-214ENST00000555233 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-214ENST00000555233 FOXO3O43524 673 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 CLCN6P51797 869 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 RGPD1P0DJD0 1748 aa8.68□□□□□ -1.02
PRKCH-214ENST00000555233 STK25O00506 426 aa8.67□□□□□ -1.02
PRKCH-214ENST00000555233 BRD4O60885 1362 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-214ENST00000555233 PIP4K2BP78356 416 aa8.67□□□□□ -1.02
PRKCH-214ENST00000555233 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-214ENST00000555233 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
PRKCH-214ENST00000555233 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
PRKCH-214ENST00000555233 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
PRKCH-214ENST00000555233 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
PRKCH-214ENST00000555233 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
PRKCH-214ENST00000555233 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
PRKCH-214ENST00000555233 ABCC6O95255 1503 aa8.65□□□□□ -1.02
PRKCH-214ENST00000555233 NSD3Q9BZ95 1437 aa8.65□□□□□ -1.02
PRKCH-214ENST00000555233 TTC21BQ7Z4L5 1316 aa8.65□□□□□ -1.02
PRKCH-214ENST00000555233 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-214ENST00000555233 SRPK2P78362 688 aaKnown RBP8.65□□□□□ -1.02
PRKCH-214ENST00000555233 TMF1P82094 1093 aa8.65□□□□□ -1.02
PRKCH-214ENST00000555233 LMOD2Q6P5Q4 547 aa8.65□□□□□ -1.02
PRKCH-214ENST00000555233 SLIT2O94813 1529 aa8.64□□□□□ -1.03
PRKCH-214ENST00000555233 SMG6Q86US8 1419 aaKnown RBP8.64□□□□□ -1.03
PRKCH-214ENST00000555233 JCADQ9P266 1359 aa8.64□□□□□ -1.03
PRKCH-214ENST00000555233 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
PRKCH-214ENST00000555233 GLI3P10071 1580 aa8.64□□□□□ -1.03
PRKCH-214ENST00000555233 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
PRKCH-214ENST00000555233 KTN1Q86UP2 1357 aaKnown RBP8.63□□□□□ -1.03
PRKCH-214ENST00000555233 KRT28Q7Z3Y7 464 aa8.63□□□□□ -1.03
PRKCH-214ENST00000555233 DCBLD2Q96PD2 775 aa8.63□□□□□ -1.03
PRKCH-214ENST00000555233 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
PRKCH-214ENST00000555233 BRWD3Q6RI45 1802 aa8.62□□□□□ -1.03
PRKCH-214ENST00000555233 THSD7AQ9UPZ6 1657 aa8.62□□□□□ -1.03
PRKCH-214ENST00000555233 ARHGEF10O15013 1369 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 FYB1O15117 783 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-214ENST00000555233 NME9Q86XW9 330 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 NCAPD2Q15021 1401 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
PRKCH-214ENST00000555233 CPDO75976 1380 aa8.61□□□□□ -1.03
PRKCH-214ENST00000555233 TTC21AQ8NDW8 1320 aa8.6□□□□□ -1.03
PRKCH-214ENST00000555233 RGS17Q9UGC6 210 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-214ENST00000555233 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
PRKCH-214ENST00000555233 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
PRKCH-214ENST00000555233 PANK3Q9H999 370 aa8.59□□□□□ -1.03
PRKCH-214ENST00000555233 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
PRKCH-214ENST00000555233 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
PRKCH-214ENST00000555233 SPATA31A6Q5VVP1 1343 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 PKD1L3Q7Z443 1732 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 PARP4Q9UKK3 1724 aaKnown RBP8.58□□□□□ -1.04
PRKCH-214ENST00000555233 FBLN1P23142 703 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
PRKCH-214ENST00000555233 LRRC59Q96AG4 307 aaKnown RBP8.58□□□□□ -1.04
PRKCH-214ENST00000555233 WDR70Q9NW82 654 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 PARD3Q8TEW0 1356 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
PRKCH-214ENST00000555233 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 EP400Q96L91 3159 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 NSD2O96028 1365 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 AATKQ6ZMQ8 1374 aa8.57□□□□□ -1.04
PRKCH-214ENST00000555233 CDK12Q9NYV4 1490 aaPredicted RBP8.57□□□□□ -1.04
PRKCH-214ENST00000555233 ATRNO75882 1429 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 PSME1Q06323 249 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 ILDR2Q71H61 639 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-214ENST00000555233 TMC1Q8TDI8 760 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 TERF2IPQ9NYB0 399 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 SBF2Q86WG5 1849 aa8.56□□□□□ -1.04
PRKCH-214ENST00000555233 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
PRKCH-214ENST00000555233 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
PRKCH-214ENST00000555233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.55□□□□□ -1.04
PRKCH-214ENST00000555233 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
PRKCH-214ENST00000555233 GGNBP2Q9H3C7 697 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms