RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-228ENST00000554592 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-228ENST00000554592 SKOR1P84550 965 aa8.39□□□□□ -1.07
ATXN3-228ENST00000554592 TRAF7Q6Q0C0 670 aa8.39□□□□□ -1.07
ATXN3-228ENST00000554592 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
ATXN3-228ENST00000554592 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
ATXN3-228ENST00000554592 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-228ENST00000554592 KCNH2Q12809 1159 aa8.38□□□□□ -1.07
ATXN3-228ENST00000554592 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
ATXN3-228ENST00000554592 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ATXN3-228ENST00000554592 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-228ENST00000554592 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
ATXN3-228ENST00000554592 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
ATXN3-228ENST00000554592 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-228ENST00000554592 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-228ENST00000554592 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-228ENST00000554592 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-228ENST00000554592 WNT7AO00755 349 aa8.36□□□□□ -1.07
ATXN3-228ENST00000554592 FOXC1Q12948 553 aa8.36□□□□□ -1.07
ATXN3-228ENST00000554592 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-228ENST00000554592 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-228ENST00000554592 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
ATXN3-228ENST00000554592 UNC93B1Q9H1C4 597 aa8.36□□□□□ -1.07
ATXN3-228ENST00000554592 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-228ENST00000554592 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
ATXN3-228ENST00000554592 WNT7BP56706 349 aa8.35□□□□□ -1.07
ATXN3-228ENST00000554592 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-228ENST00000554592 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
ATXN3-228ENST00000554592 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
ATXN3-228ENST00000554592 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-228ENST00000554592 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-228ENST00000554592 SH3BP2P78314 561 aa8.33□□□□□ -1.08
ATXN3-228ENST00000554592 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
ATXN3-228ENST00000554592 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-228ENST00000554592 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
ATXN3-228ENST00000554592 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
ATXN3-228ENST00000554592 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
ATXN3-228ENST00000554592 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
ATXN3-228ENST00000554592 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-228ENST00000554592 DGAT1O75907 488 aa8.31□□□□□ -1.08
ATXN3-228ENST00000554592 BAP1Q92560 729 aa8.31□□□□□ -1.08
ATXN3-228ENST00000554592 TSC1Q92574 1164 aa8.31□□□□□ -1.08
ATXN3-228ENST00000554592 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-228ENST00000554592 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-228ENST00000554592 SIAH2O43255 324 aa8.3□□□□□ -1.08
ATXN3-228ENST00000554592 CTHP32929 405 aa8.3□□□□□ -1.08
ATXN3-228ENST00000554592 MYT1Q01538 1121 aa8.29□□□□□ -1.08
ATXN3-228ENST00000554592 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
ATXN3-228ENST00000554592 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-228ENST00000554592 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
ATXN3-228ENST00000554592 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
ATXN3-228ENST00000554592 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 SOCS7O14512 581 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 SMPD1P17405 629 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 RFC5P40937 340 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 CYP4X1Q8N118 509 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
ATXN3-228ENST00000554592 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
ATXN3-228ENST00000554592 AVPP01185 164 aa8.27□□□□□ -1.09
ATXN3-228ENST00000554592 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
ATXN3-228ENST00000554592 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
ATXN3-228ENST00000554592 J3QL48 77 aa8.26□□□□□ -1.09
ATXN3-228ENST00000554592 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-228ENST00000554592 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
ATXN3-228ENST00000554592 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
ATXN3-228ENST00000554592 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
ATXN3-228ENST00000554592 ABCA8O94911 1581 aa8.25□□□□□ -1.09
ATXN3-228ENST00000554592 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-228ENST00000554592 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
ATXN3-228ENST00000554592 TTC24A2A3L6 582 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-228ENST00000554592 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 CRIPAKQ8N1N5 446 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-228ENST00000554592 KIF21BO75037 1637 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 AP1G2O75843 785 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
ATXN3-228ENST00000554592 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 MPNDQ8N594 471 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-228ENST00000554592 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-228ENST00000554592 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-228ENST00000554592 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
ATXN3-228ENST00000554592 NR6A1Q15406 480 aa8.22□□□□□ -1.09
ATXN3-228ENST00000554592 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
ATXN3-228ENST00000554592 ATP1B4Q9UN42 357 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-228ENST00000554592 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-228ENST00000554592 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-228ENST00000554592 SH3BP5LQ7L8J4 393 aa8.21□□□□□ -1.1
ATXN3-228ENST00000554592 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
ATXN3-228ENST00000554592 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
ATXN3-228ENST00000554592 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms