RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TWISTNBQ3B726 338 aaPredicted RBP19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 DLC1Q96QB1 1528 aa19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.75■□□□□ 0.75
ARHGEF40-203ENST00000554514 SPATA31D1Q6ZQQ2 1576 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 AEBP1Q8IUX7 1158 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 CPS1P31327 1500 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 ZMYM3Q14202 1370 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 NUCB1Q02818 461 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
ARHGEF40-203ENST00000554514 ZBTB7BO15156 539 aaPredicted RBP19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 ARXQ96QS3 562 aa19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 ANTXR1Q9H6X2 564 aa19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 CDC42BPGQ6DT37 1551 aa19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 SETD1AO15047 1707 aaKnown RBP19.72■□□□□ 0.75
ARHGEF40-203ENST00000554514 AGLP35573 1532 aa19.71■□□□□ 0.75
ARHGEF40-203ENST00000554514 SULT6B1Q6IMI4 303 aa19.71■□□□□ 0.75
ARHGEF40-203ENST00000554514 KRT24Q2M2I5 525 aa19.71■□□□□ 0.75
ARHGEF40-203ENST00000554514 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF40-203ENST00000554514 NRXN3Q9Y4C0 1643 aa19.7■□□□□ 0.74
ARHGEF40-203ENST00000554514 CFAP44Q96MT7 982 aa19.69■□□□□ 0.74
ARHGEF40-203ENST00000554514 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 MCM10Q7L590 875 aa19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
ARHGEF40-203ENST00000554514 EIF4A2Q14240 407 aaKnown RBP19.67■□□□□ 0.74
ARHGEF40-203ENST00000554514 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
ARHGEF40-203ENST00000554514 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
ARHGEF40-203ENST00000554514 SIRT2Q8IXJ6 389 aa19.66■□□□□ 0.74
ARHGEF40-203ENST00000554514 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
ARHGEF40-203ENST00000554514 AATKQ6ZMQ8 1374 aa19.66■□□□□ 0.74
ARHGEF40-203ENST00000554514 ACEP12821 1306 aa19.66■□□□□ 0.74
ARHGEF40-203ENST00000554514 TNRQ92752 1358 aa19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 REREQ9P2R6 1566 aa19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 BRPF1P55201 1214 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 ARHGAP45Q92619 1136 aa19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
ARHGEF40-203ENST00000554514 CEBPAP49715 358 aaPredicted RBP19.64■□□□□ 0.73
ARHGEF40-203ENST00000554514 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
ARHGEF40-203ENST00000554514 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
ARHGEF40-203ENST00000554514 ABCC4O15439 1325 aa19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 PTCH1Q13635 1447 aa19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 APBB1O00213 710 aa19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 GCC1Q96CN9 775 aa19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
ARHGEF40-203ENST00000554514 API5Q9BZZ5 524 aaKnown RBP19.62■□□□□ 0.73
ARHGEF40-203ENST00000554514 CHMP4BQ9H444 224 aaKnown RBP19.62■□□□□ 0.73
ARHGEF40-203ENST00000554514 LTKP29376 864 aa19.62■□□□□ 0.73
ARHGEF40-203ENST00000554514 FOXD4L1Q9NU39 408 aa19.62■□□□□ 0.73
ARHGEF40-203ENST00000554514 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
ARHGEF40-203ENST00000554514 BMP2KLQ5H9B9 411 aa19.6■□□□□ 0.73
ARHGEF40-203ENST00000554514 FOXO3O43524 673 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 PIK3R4Q99570 1358 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 ITSN1Q15811 1721 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 MON2Q7Z3U7 1717 aa19.58■□□□□ 0.73
ARHGEF40-203ENST00000554514 HSP90AB1P08238 724 aaKnown RBP19.57■□□□□ 0.72
ARHGEF40-203ENST00000554514 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
ARHGEF40-203ENST00000554514 MCM4P33991 863 aa19.57■□□□□ 0.72
ARHGEF40-203ENST00000554514 C3P01024 1663 aa19.56■□□□□ 0.72
ARHGEF40-203ENST00000554514 SIRT1Q96EB6 747 aa19.56■□□□□ 0.72
ARHGEF40-203ENST00000554514 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
ARHGEF40-203ENST00000554514 TECPR2O15040 1411 aa19.56■□□□□ 0.72
ARHGEF40-203ENST00000554514 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
ARHGEF40-203ENST00000554514 RBM25P49756 843 aaKnown RBP19.55■□□□□ 0.72
ARHGEF40-203ENST00000554514 ADAMTS13Q76LX8 1427 aa19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 AKAP12Q02952 1782 aa19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
ARHGEF40-203ENST00000554514 CD2BP2O95400 341 aaKnown RBP19.53■□□□□ 0.72
ARHGEF40-203ENST00000554514 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
ARHGEF40-203ENST00000554514 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF40-203ENST00000554514 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF40-203ENST00000554514 CHL1O00533 1208 aa19.52■□□□□ 0.72
ARHGEF40-203ENST00000554514 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
ARHGEF40-203ENST00000554514 AMOTL2Q9Y2J4 779 aa19.52■□□□□ 0.72
ARHGEF40-203ENST00000554514 MEIS3Q99687 375 aa19.52■□□□□ 0.72
ARHGEF40-203ENST00000554514 KNDC1Q76NI1 1749 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 MSH6P52701 1360 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 USP6P35125 1406 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 PLEKHM2Q8IWE5 1019 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 F6X3S4 739 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 AMPHP49418 695 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms