RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LRP6O75581 1613 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 C1orf115Q9H7X2 142 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 ANO8Q9HCE9 1232 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-206ENST00000554429 KNDC1Q76NI1 1749 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 MSH6P52701 1360 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 NALCNQ8IZF0 1738 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 ASXL1Q8IXJ9 1541 aa3.91□□□□□ -1.78
PRPF39-206ENST00000554429 KIF1BO60333 1816 aa3.9□□□□□ -1.78
PRPF39-206ENST00000554429 HDGFP51858 240 aaKnown RBP3.9□□□□□ -1.78
PRPF39-206ENST00000554429 IDI1Q13907 227 aa3.9□□□□□ -1.78
PRPF39-206ENST00000554429 SUZ12Q15022 739 aaKnown RBP3.9□□□□□ -1.78
PRPF39-206ENST00000554429 KANK4Q5T7N3 995 aaPredicted RBP3.9□□□□□ -1.78
PRPF39-206ENST00000554429 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.9□□□□□ -1.78
PRPF39-206ENST00000554429 BRPF3Q9ULD4 1205 aa3.9□□□□□ -1.78
PRPF39-206ENST00000554429 V9GY48 417 aaPredicted RBP3.9□□□□□ -1.78
PRPF39-206ENST00000554429 ANKRD50Q9ULJ7 1429 aa3.9□□□□□ -1.78
PRPF39-206ENST00000554429 NEXMIFQ5QGS0 1516 aa3.9□□□□□ -1.78
PRPF39-206ENST00000554429 FAM181BA6NEQ2 426 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 GOLGA8CPA6NN73 597 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 PIP4K2BP78356 416 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 CABP2Q9NPB3 220 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 IFT172Q9UG01 1749 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 PPLO60437 1756 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 PTCH1Q13635 1447 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-206ENST00000554429 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-206ENST00000554429 PCDHGA4Q9Y5G9 962 aa3.9□□□□□ -1.79
PRPF39-206ENST00000554429 SOX12O15370 315 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 WIPF1O43516 503 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 ZEB1P37275 1124 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-206ENST00000554429 PPP4R3BQ5MIZ7 849 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 KHSRPQ92945 711 aaKnown RBP eCLIP3.89□□□□□ -1.795e-10■■■□□ 16.6
PRPF39-206ENST00000554429 MST1RQ04912 1400 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 PTPRUQ92729 1446 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 CLTCL1P53675 1640 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 NUDT7P0C024 238 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 KCNC4Q03721 635 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 DMRTA1Q5VZB9 504 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 CDC42BPGQ6DT37 1551 aa3.89□□□□□ -1.79
PRPF39-206ENST00000554429 POTEAQ6S8J7 498 aa3.88□□□□□ -1.79
PRPF39-206ENST00000554429 ZFP91Q96JP5 570 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-206ENST00000554429 ADGRL3Q9HAR2 1447 aa3.88□□□□□ -1.79
PRPF39-206ENST00000554429 KIF1AQ12756 1690 aa3.88□□□□□ -1.79
PRPF39-206ENST00000554429 BRPF1P55201 1214 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-206ENST00000554429 ZNF772Q68DY9 489 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-206ENST00000554429 SLAIN2Q9P270 581 aa3.88□□□□□ -1.79
PRPF39-206ENST00000554429 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
PRPF39-206ENST00000554429 FOXD4L5Q5VV16 416 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 FOXD4L4Q8WXT5 416 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 LRP5O75197 1615 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 NWD2Q9ULI1 1742 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 RAD21O60216 631 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 CADPS2Q86UW7 1296 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 PROSER2Q86WR7 435 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 ZNF592Q92610 1267 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 WNT2BQ93097 391 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 C19orf44Q9H6X5 657 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 RBM25P49756 843 aaKnown RBP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 TMED8Q6PL24 325 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 BCCIPQ9P287 314 aaKnown RBP eCLIP3.87□□□□□ -1.79
PRPF39-206ENST00000554429 TECPR2O15040 1411 aa3.87□□□□□ -1.79
PRPF39-206ENST00000554429 KCTD17Q8N5Z5 321 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 ABCA3Q99758 1704 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 RRP7BPQ9NSQ0 103 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 FMN2Q9NZ56 1722 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 ATRNO75882 1429 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 BHMG1C9JSJ3 638 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-206ENST00000554429 MTMR7Q9Y216 660 aa3.86□□□□□ -1.79
PRPF39-206ENST00000554429 PNPLA6Q8IY17 1366 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 HFM1A2PYH4 1435 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 BBXQ8WY36 941 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-206ENST00000554429 UPF1Q92900 1129 aaKnown RBP eCLIP3.85□□□□□ -1.79
PRPF39-206ENST00000554429 MYOM2P54296 1465 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 CWC22Q9HCG8 908 aaKnown RBP3.85□□□□□ -1.79
PRPF39-206ENST00000554429 RPGRIP1LQ68CZ1 1315 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 ADGRB2O60241 1585 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 RGS12O14924 1447 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 RRBP1Q9P2E9 1410 aaKnown RBP3.85□□□□□ -1.79
PRPF39-206ENST00000554429 CRYBG1Q9Y4K1 1723 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 C1orf167Q5SNV9 1468 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 PXDNQ92626 1479 aa3.85□□□□□ -1.79
PRPF39-206ENST00000554429 DGAT1O75907 488 aa3.84□□□□□ -1.79
PRPF39-206ENST00000554429 BRINP3Q76B58 766 aa3.84□□□□□ -1.79
PRPF39-206ENST00000554429 NAP1L5Q96NT1 182 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-206ENST00000554429 USP35Q9P2H5 1018 aa3.84□□□□□ -1.79
PRPF39-206ENST00000554429 SOS2Q07890 1332 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-206ENST00000554429 NRAPQ86VF7 1730 aa3.84□□□□□ -1.79
PRPF39-206ENST00000554429 NRXN1Q9ULB1 1477 aa3.84□□□□□ -1.8
PRPF39-206ENST00000554429 ZNF526Q8TF50 670 aaPredicted RBP3.84□□□□□ -1.8
PRPF39-206ENST00000554429 SLC26A8Q96RN1 970 aa3.84□□□□□ -1.8
PRPF39-206ENST00000554429 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.84□□□□□ -1.8
PRPF39-206ENST00000554429 ZMYND15Q9H091 742 aa3.83□□□□□ -1.8
PRPF39-206ENST00000554429 ACIN1Q9UKV3 1341 aaKnown RBP3.83□□□□□ -1.8
PRPF39-206ENST00000554429 DLC1Q96QB1 1528 aa3.83□□□□□ -1.8
PRPF39-206ENST00000554429 PLCH1Q4KWH8 1693 aa3.83□□□□□ -1.8
PRPF39-206ENST00000554429 CENPBP07199 599 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-206ENST00000554429 FNBP4Q8N3X1 1017 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-206ENST00000554429 MRPL50Q8N5N7 158 aaKnown RBP3.83□□□□□ -1.8
PRPF39-206ENST00000554429 LRRC59Q96AG4 307 aaKnown RBP3.83□□□□□ -1.8
PRPF39-206ENST00000554429 SIRT1Q96EB6 747 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms