RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
ITGA7-208ENST00000554327 HSP90AB2PQ58FF8 381 aa21.59■■□□□ 1.05
ITGA7-208ENST00000554327 IL13P35225 146 aa21.58■■□□□ 1.05
ITGA7-208ENST00000554327 USP19O94966 1318 aa21.58■■□□□ 1.05
ITGA7-208ENST00000554327 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
ITGA7-208ENST00000554327 SPATA31A3Q5VYP0 1347 aa21.57■■□□□ 1.04
ITGA7-208ENST00000554327 DUSP27Q5VZP5 1158 aa21.57■■□□□ 1.04
ITGA7-208ENST00000554327 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
ITGA7-208ENST00000554327 RGPD1P0DJD0 1748 aa21.57■■□□□ 1.04
ITGA7-208ENST00000554327 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
ITGA7-208ENST00000554327 FLT4P35916 1363 aa21.56■■□□□ 1.04
ITGA7-208ENST00000554327 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
ITGA7-208ENST00000554327 RGPD5Q99666 1765 aa21.55■■□□□ 1.04
ITGA7-208ENST00000554327 GCP02774 474 aa21.55■■□□□ 1.04
ITGA7-208ENST00000554327 AMPHP49418 695 aa21.55■■□□□ 1.04
ITGA7-208ENST00000554327 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
ITGA7-208ENST00000554327 KCNH5Q8NCM2 988 aa21.54■■□□□ 1.04
ITGA7-208ENST00000554327 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
ITGA7-208ENST00000554327 TCP11L2Q8N4U5 519 aa21.54■■□□□ 1.04
ITGA7-208ENST00000554327 HOXC9P31274 260 aa21.53■■□□□ 1.04
ITGA7-208ENST00000554327 FBXO41Q8TF61 875 aa21.53■■□□□ 1.04
ITGA7-208ENST00000554327 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
ITGA7-208ENST00000554327 CABLES1Q8TDN4 633 aa21.52■■□□□ 1.04
ITGA7-208ENST00000554327 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.04
ITGA7-208ENST00000554327 HMOX1P09601 288 aa21.52■■□□□ 1.04
ITGA7-208ENST00000554327 WWC1Q8IX03 1113 aa21.52■■□□□ 1.04
ITGA7-208ENST00000554327 RGPD2P0DJD1 1756 aa21.52■■□□□ 1.04
ITGA7-208ENST00000554327 ARHGEF10O15013 1369 aa21.51■■□□□ 1.03
ITGA7-208ENST00000554327 E9PSI1 815 aa21.51■■□□□ 1.03
ITGA7-208ENST00000554327 PLEKHF1Q96S99 279 aa21.51■■□□□ 1.03
ITGA7-208ENST00000554327 KIF24Q5T7B8 1368 aa21.51■■□□□ 1.03
ITGA7-208ENST00000554327 SPINK5Q9NQ38 1064 aaPredicted RBP21.5■■□□□ 1.03
ITGA7-208ENST00000554327 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
ITGA7-208ENST00000554327 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
ITGA7-208ENST00000554327 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
ITGA7-208ENST00000554327 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
ITGA7-208ENST00000554327 ARHGEF25Q86VW2 580 aa21.48■■□□□ 1.03
ITGA7-208ENST00000554327 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
ITGA7-208ENST00000554327 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
ITGA7-208ENST00000554327 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
ITGA7-208ENST00000554327 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
ITGA7-208ENST00000554327 PHLPP1O60346 1717 aa21.47■■□□□ 1.03
ITGA7-208ENST00000554327 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
ITGA7-208ENST00000554327 COL18A1P39060 1754 aa21.47■■□□□ 1.03
ITGA7-208ENST00000554327 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
ITGA7-208ENST00000554327 IP6K1Q92551 441 aa21.47■■□□□ 1.03
ITGA7-208ENST00000554327 DLG5Q8TDM6 1919 aa21.46■■□□□ 1.03
ITGA7-208ENST00000554327 FCHSD2O94868 740 aa21.46■■□□□ 1.03
ITGA7-208ENST00000554327 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
ITGA7-208ENST00000554327 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
ITGA7-208ENST00000554327 LTV1Q96GA3 475 aaPredicted RBP21.46■■□□□ 1.03
ITGA7-208ENST00000554327 PIP4K2BP78356 416 aa21.44■■□□□ 1.02
ITGA7-208ENST00000554327 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
ITGA7-208ENST00000554327 TOM1O60784 492 aa21.43■■□□□ 1.02
ITGA7-208ENST00000554327 SULT6B1Q6IMI4 303 aa21.43■■□□□ 1.02
ITGA7-208ENST00000554327 COL16A1Q07092 1604 aaPredicted RBP21.43■■□□□ 1.02
ITGA7-208ENST00000554327 EYA1Q99502 592 aa21.43■■□□□ 1.02
ITGA7-208ENST00000554327 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
ITGA7-208ENST00000554327 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
ITGA7-208ENST00000554327 MAPK8IP3Q9UPT6 1336 aa21.43■■□□□ 1.02
ITGA7-208ENST00000554327 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
ITGA7-208ENST00000554327 PLIN1O60240 522 aa21.41■■□□□ 1.02
ITGA7-208ENST00000554327 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
ITGA7-208ENST00000554327 IGSF1Q8N6C5 1336 aa21.41■■□□□ 1.02
ITGA7-208ENST00000554327 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
ITGA7-208ENST00000554327 EXOC6Q8TAG9 804 aa21.4■■□□□ 1.02
ITGA7-208ENST00000554327 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
ITGA7-208ENST00000554327 COL22A1Q8NFW1 1626 aaPredicted RBP21.39■■□□□ 1.01
ITGA7-208ENST00000554327 TMPOP42166 694 aaKnown RBP21.39■■□□□ 1.01
ITGA7-208ENST00000554327 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
ITGA7-208ENST00000554327 CCDC136Q96JN2 1154 aa21.39■■□□□ 1.01
ITGA7-208ENST00000554327 TSHZ2Q9NRE2 1034 aa21.38■■□□□ 1.01
ITGA7-208ENST00000554327 KDRP35968 1356 aa21.38■■□□□ 1.01
ITGA7-208ENST00000554327 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
ITGA7-208ENST00000554327 CPDO75976 1380 aa21.37■■□□□ 1.01
ITGA7-208ENST00000554327 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
ITGA7-208ENST00000554327 CAMTA1Q9Y6Y1 1673 aa21.37■■□□□ 1.01
ITGA7-208ENST00000554327 LMO7Q8WWI1 1683 aa21.36■■□□□ 1.01
ITGA7-208ENST00000554327 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
ITGA7-208ENST00000554327 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
ITGA7-208ENST00000554327 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
ITGA7-208ENST00000554327 ABCC6O95255 1503 aa21.35■■□□□ 1.01
ITGA7-208ENST00000554327 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.35■■□□□ 1.01
ITGA7-208ENST00000554327 HAP1P54257 671 aaPredicted RBP21.34■■□□□ 1.01
ITGA7-208ENST00000554327 RIPK4P57078 832 aa21.34■■□□□ 1.01
ITGA7-208ENST00000554327 TRIM35Q9UPQ4 493 aa21.34■■□□□ 1.01
ITGA7-208ENST00000554327 NEFMP07197 916 aa21.34■■□□□ 1.01
ITGA7-208ENST00000554327 ERBB3P21860 1342 aa21.33■■□□□ 1.01
ITGA7-208ENST00000554327 MYH16Q9H6N6 1097 aa21.33■■□□□ 1.01
ITGA7-208ENST00000554327 NFE2L2Q16236 605 aa21.32■■□□□ 1
ITGA7-208ENST00000554327 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
ITGA7-208ENST00000554327 CRBNQ96SW2 442 aa21.32■■□□□ 1
ITGA7-208ENST00000554327 C20orf194Q5TEA3 1177 aa21.31■■□□□ 1
ITGA7-208ENST00000554327 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
ITGA7-208ENST00000554327 BCAR3O75815 825 aa21.3■■□□□ 1
ITGA7-208ENST00000554327 NCAPD2Q15021 1401 aa21.29■■□□□ 1
ITGA7-208ENST00000554327 IL16Q14005 1332 aa21.28■■□□□ 1
ITGA7-208ENST00000554327 MTHFSDQ2M296 383 aaKnown RBP21.27■□□□□ 0.99
ITGA7-208ENST00000554327 COL5A2P05997 1499 aaPredicted RBP21.26■□□□□ 0.99
ITGA7-208ENST00000554327 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms