RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
SMARCE1P3-201ENST00000553649 CDC42BPAQ5VT25 1732 aa9.14□□□□□ -0.95
SMARCE1P3-201ENST00000553649 POTECB2RU33 542 aa9.13□□□□□ -0.95
SMARCE1P3-201ENST00000553649 ZPR1O75312 459 aa9.13□□□□□ -0.95
SMARCE1P3-201ENST00000553649 TMUB1Q9BVT8 246 aa9.13□□□□□ -0.95
SMARCE1P3-201ENST00000553649 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
SMARCE1P3-201ENST00000553649 GPATCH8Q9UKJ3 1502 aaKnown RBP9.13□□□□□ -0.95
SMARCE1P3-201ENST00000553649 YY1P25490 414 aa9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 PADI6Q6TGC4 694 aa9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 ARHGAP23Q9P227 1491 aa9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 RTEL1-TNFRSF6BF6WH68 1400 aa9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
SMARCE1P3-201ENST00000553649 LRRIQ1Q96JM4 1722 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 SHPRHQ149N8 1683 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 ADGBQ8N7X0 1667 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 CCDC18Q5T9S5 1454 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 KCNA6P17658 529 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 GGCXP38435 758 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 E2F4Q16254 413 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
SMARCE1P3-201ENST00000553649 PRDM15P57071 1507 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 MYT1Q01538 1121 aa9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 CCDC125Q86Z20 511 aa9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 EYA1Q99502 592 aa9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 MSH6P52701 1360 aa9.1□□□□□ -0.95
SMARCE1P3-201ENST00000553649 AHDC1Q5TGY3 1603 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 MBD5Q9P267 1494 aa9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 DIP2AQ14689 1571 aa9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 SLC19A1P41440 591 aa9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 SLIT1O75093 1534 aa9.09□□□□□ -0.95
SMARCE1P3-201ENST00000553649 WASHC2CQ9Y4E1 1318 aa9.08□□□□□ -0.96
SMARCE1P3-201ENST00000553649 NWD1Q149M9 1564 aa9.08□□□□□ -0.96
SMARCE1P3-201ENST00000553649 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
SMARCE1P3-201ENST00000553649 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
SMARCE1P3-201ENST00000553649 NHSL1Q5SYE7 1610 aa9.08□□□□□ -0.96
SMARCE1P3-201ENST00000553649 CASKIN1Q8WXD9 1431 aa9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 ABCC3O15438 1527 aa9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 KIF3BO15066 747 aa9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 C8orf37Q96NL8 207 aa9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 NKTRP30414 1462 aaKnown RBP9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 CAMSAP2Q08AD1 1489 aa9.07□□□□□ -0.96
SMARCE1P3-201ENST00000553649 EP400Q96L91 3159 aa9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PPEF1O14829 653 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 TLL1O43897 1013 aa9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 HRCP23327 699 aa9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 SPRYD7Q5W111 196 aa9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 BCL9LQ86UU0 1499 aa9.06□□□□□ -0.96
SMARCE1P3-201ENST00000553649 ERVK-7P63135 1459 aa9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 DEFB132Q7Z7B7 95 aa9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
SMARCE1P3-201ENST00000553649 DGAT1O75907 488 aa9.04□□□□□ -0.96
SMARCE1P3-201ENST00000553649 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
SMARCE1P3-201ENST00000553649 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PRR20EP86478 221 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PRR20CP86479 221 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PRR20DP86480 221 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PRR20BP86481 221 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PRR20AP86496 221 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 ZNF598Q86UK7 904 aaKnown RBP9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
SMARCE1P3-201ENST00000553649 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 TET3O43151 1660 aa9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 CFDP1Q9UEE9 299 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 SETD5Q9C0A6 1442 aa9.02□□□□□ -0.97
SMARCE1P3-201ENST00000553649 GDF9O60383 454 aa9.01□□□□□ -0.97
SMARCE1P3-201ENST00000553649 FYCO1Q9BQS8 1478 aa9.01□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ATRNO75882 1429 aa9□□□□□ -0.97
SMARCE1P3-201ENST00000553649 S1PR4O95977 384 aa9□□□□□ -0.97
SMARCE1P3-201ENST00000553649 BRINP3Q76B58 766 aa9□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ANKLE1Q8NAG6 615 aa9□□□□□ -0.97
SMARCE1P3-201ENST00000553649 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
SMARCE1P3-201ENST00000553649 PLA2G2CQ5R387 149 aa8.99□□□□□ -0.97
SMARCE1P3-201ENST00000553649 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1P3-201ENST00000553649 PNPLA6Q8IY17 1366 aa8.99□□□□□ -0.97
SMARCE1P3-201ENST00000553649 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ARHGAP31Q2M1Z3 1444 aa8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 CCDC141Q6ZP82 1450 aa8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 USP21Q9UK80 565 aa8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 MROH1Q8NDA8 1641 aa8.98□□□□□ -0.97
SMARCE1P3-201ENST00000553649 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
SMARCE1P3-201ENST00000553649 FAM187AA6NFU0 413 aa8.97□□□□□ -0.97
SMARCE1P3-201ENST00000553649 ST8SIA5O15466 376 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms