RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 IRF5Q13568 498 aa14.1□□□□□ -0.15
PCNX1-205ENST00000553508 DACH1Q9UI36 760 aa14.1□□□□□ -0.15
PCNX1-205ENST00000553508 WDR4P57081 412 aaKnown RBP14.09□□□□□ -0.15
PCNX1-205ENST00000553508 CTC1Q2NKJ3 1217 aa14.09□□□□□ -0.15
PCNX1-205ENST00000553508 CDV3Q9UKY7 258 aaKnown RBP14.09□□□□□ -0.15
PCNX1-205ENST00000553508 CAPN5O15484 640 aaPredicted RBP14.08□□□□□ -0.16
PCNX1-205ENST00000553508 RAD21O60216 631 aa14.07□□□□□ -0.16
PCNX1-205ENST00000553508 VAC14Q08AM6 782 aa14.07□□□□□ -0.16
PCNX1-205ENST00000553508 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
PCNX1-205ENST00000553508 SMCPP49901 116 aaPredicted RBP14.06□□□□□ -0.16
PCNX1-205ENST00000553508 NBPF20Q3BBV1 942 aa14.06□□□□□ -0.16
PCNX1-205ENST00000553508 CCDC116Q8IYX3 515 aa14.06□□□□□ -0.16
PCNX1-205ENST00000553508 CRIPAKQ8N1N5 446 aa14.06□□□□□ -0.16
PCNX1-205ENST00000553508 ZIC2O95409 532 aaPredicted RBP14.05□□□□□ -0.16
PCNX1-205ENST00000553508 TIMP2P16035 220 aa14.04□□□□□ -0.16
PCNX1-205ENST00000553508 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
PCNX1-205ENST00000553508 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
PCNX1-205ENST00000553508 ZFAND3Q9H8U3 227 aa14.04□□□□□ -0.16
PCNX1-205ENST00000553508 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.17
PCNX1-205ENST00000553508 PPP1R26Q5T8A7 1209 aaPredicted RBP14.02□□□□□ -0.17
PCNX1-205ENST00000553508 KLF16Q9BXK1 252 aaPredicted RBP14.02□□□□□ -0.17
PCNX1-205ENST00000553508 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
PCNX1-205ENST00000553508 BMP1P13497 986 aa14□□□□□ -0.17
PCNX1-205ENST00000553508 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
PCNX1-205ENST00000553508 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCNX1-205ENST00000553508 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
PCNX1-205ENST00000553508 TMPRSS4Q9NRS4 437 aa13.99□□□□□ -0.17
PCNX1-205ENST00000553508 ATP13A2Q9NQ11 1180 aa13.98□□□□□ -0.17
PCNX1-205ENST00000553508 ESPNB1AK53 854 aa13.97□□□□□ -0.17
PCNX1-205ENST00000553508 POTECB2RU33 542 aa13.97□□□□□ -0.17
PCNX1-205ENST00000553508 DHX9Q08211 1270 aaKnown RBP13.97□□□□□ -0.17
PCNX1-205ENST00000553508 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
PCNX1-205ENST00000553508 PGPEP1Q9NXJ5 209 aa13.97□□□□□ -0.17
PCNX1-205ENST00000553508 ERVH48-1M5A8F1 160 aa13.96□□□□□ -0.17
PCNX1-205ENST00000553508 MCCD1P59942 119 aaPredicted RBP13.96□□□□□ -0.17
PCNX1-205ENST00000553508 GMPR2Q9P2T1 348 aaKnown RBP13.96□□□□□ -0.17
PCNX1-205ENST00000553508 ZNF787Q6DD87 383 aa13.95□□□□□ -0.18
PCNX1-205ENST00000553508 ZNF592Q92610 1267 aa13.95□□□□□ -0.18
PCNX1-205ENST00000553508 CBLBQ13191 982 aa13.94□□□□□ -0.18
PCNX1-205ENST00000553508 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
PCNX1-205ENST00000553508 TRIM46Q7Z4K8 759 aa13.93□□□□□ -0.18
PCNX1-205ENST00000553508 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
PCNX1-205ENST00000553508 ZNF784Q8NCA9 323 aaPredicted RBP13.92□□□□□ -0.18
PCNX1-205ENST00000553508 SEMA3FQ13275 785 aa13.91□□□□□ -0.18
PCNX1-205ENST00000553508 MRPL14Q6P1L8 145 aaKnown RBP13.91□□□□□ -0.18
PCNX1-205ENST00000553508 SEPT12Q8IYM1 358 aa13.91□□□□□ -0.18
PCNX1-205ENST00000553508 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
PCNX1-205ENST00000553508 CYLDQ9NQC7 956 aa13.9□□□□□ -0.18
PCNX1-205ENST00000553508 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
PCNX1-205ENST00000553508 PURBQ96QR8 312 aaKnown RBP13.89□□□□□ -0.19
PCNX1-205ENST00000553508 POM121CA8CG34 1229 aa13.88□□□□□ -0.19
PCNX1-205ENST00000553508 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
PCNX1-205ENST00000553508 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
PCNX1-205ENST00000553508 PCDHB11Q9Y5F2 797 aa13.88□□□□□ -0.19
PCNX1-205ENST00000553508 SCARF1Q14162 830 aa13.87□□□□□ -0.19
PCNX1-205ENST00000553508 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
PCNX1-205ENST00000553508 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
PCNX1-205ENST00000553508 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
PCNX1-205ENST00000553508 AGBL1Q96MI9 1066 aa13.86□□□□□ -0.19
PCNX1-205ENST00000553508 UPP2O95045 317 aa13.85□□□□□ -0.19
PCNX1-205ENST00000553508 BMP2P12643 396 aa13.85□□□□□ -0.19
PCNX1-205ENST00000553508 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
PCNX1-205ENST00000553508 LILRA1O75019 489 aa13.84□□□□□ -0.19
PCNX1-205ENST00000553508 SOX11P35716 441 aa13.84□□□□□ -0.19
PCNX1-205ENST00000553508 LINC00528Q8N1L1 170 aa13.84□□□□□ -0.19
PCNX1-205ENST00000553508 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
PCNX1-205ENST00000553508 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
PCNX1-205ENST00000553508 SNRPBP14678 240 aaKnown RBP13.83□□□□□ -0.2
PCNX1-205ENST00000553508 RELBQ01201 579 aa13.83□□□□□ -0.2
PCNX1-205ENST00000553508 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
PCNX1-205ENST00000553508 Q6ZVU0 165 aa13.83□□□□□ -0.2
PCNX1-205ENST00000553508 RNF135Q8IUD6 432 aa13.83□□□□□ -0.2
PCNX1-205ENST00000553508 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
PCNX1-205ENST00000553508 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
PCNX1-205ENST00000553508 SCTRP47872 440 aa13.81□□□□□ -0.2
PCNX1-205ENST00000553508 PHTF2Q8N3S3 785 aa13.81□□□□□ -0.2
PCNX1-205ENST00000553508 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
PCNX1-205ENST00000553508 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
PCNX1-205ENST00000553508 ALG2Q9H553 416 aa13.81□□□□□ -0.2
PCNX1-205ENST00000553508 A6NJR5 290 aa13.8□□□□□ -0.2
PCNX1-205ENST00000553508 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
PCNX1-205ENST00000553508 KIFC2Q96AC6 838 aa13.8□□□□□ -0.2
PCNX1-205ENST00000553508 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
PCNX1-205ENST00000553508 ZNF395Q9H8N7 513 aaPredicted RBP13.8□□□□□ -0.2
PCNX1-205ENST00000553508 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
PCNX1-205ENST00000553508 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
PCNX1-205ENST00000553508 PIK3CDO00329 1044 aa13.78□□□□□ -0.2
PCNX1-205ENST00000553508 ADAMTS19Q8TE59 1207 aa13.78□□□□□ -0.2
PCNX1-205ENST00000553508 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
PCNX1-205ENST00000553508 ADH1AP07327 375 aa13.77□□□□□ -0.21
PCNX1-205ENST00000553508 ERVK-9P63128 1117 aa13.77□□□□□ -0.21
PCNX1-205ENST00000553508 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
PCNX1-205ENST00000553508 OXLD1Q5BKU9 147 aa13.76□□□□□ -0.21
PCNX1-205ENST00000553508 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
PCNX1-205ENST00000553508 KDF1Q8NAX2 398 aaPredicted RBP13.74□□□□□ -0.21
PCNX1-205ENST00000553508 ATP5J2-PTCD1G3V325 749 aa13.73□□□□□ -0.21
PCNX1-205ENST00000553508 MYCP01106 439 aaPredicted RBP13.73□□□□□ -0.21
PCNX1-205ENST00000553508 SKIP12755 728 aa13.73□□□□□ -0.21
PCNX1-205ENST00000553508 PTGIRP43119 386 aa13.73□□□□□ -0.21
PCNX1-205ENST00000553508 PLPP7Q8NBV4 271 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms