RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DZIP1LQ8IYY4 767 aaKnown RBP16.5■□□□□ 0.23
SHMT2-205ENST00000553474 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
SHMT2-205ENST00000553474 RIPK4P57078 832 aa16.49■□□□□ 0.23
SHMT2-205ENST00000553474 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
SHMT2-205ENST00000553474 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
SHMT2-205ENST00000553474 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
SHMT2-205ENST00000553474 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-205ENST00000553474 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
SHMT2-205ENST00000553474 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-205ENST00000553474 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
SHMT2-205ENST00000553474 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
SHMT2-205ENST00000553474 RLBP1P12271 317 aa16.48■□□□□ 0.23
SHMT2-205ENST00000553474 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-205ENST00000553474 DDX19BQ9UMR2 479 aa16.48■□□□□ 0.23
SHMT2-205ENST00000553474 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
SHMT2-205ENST00000553474 EXOSC9Q06265 439 aaKnown RBP16.47■□□□□ 0.23
SHMT2-205ENST00000553474 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
SHMT2-205ENST00000553474 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
SHMT2-205ENST00000553474 NBR1Q14596 966 aa16.46■□□□□ 0.22
SHMT2-205ENST00000553474 ATF7IPQ6VMQ6 1270 aa16.46■□□□□ 0.22
SHMT2-205ENST00000553474 RGPD8O14715 1765 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-205ENST00000553474 FMN2Q9NZ56 1722 aa16.45■□□□□ 0.22
SHMT2-205ENST00000553474 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
SHMT2-205ENST00000553474 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
SHMT2-205ENST00000553474 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
SHMT2-205ENST00000553474 HDAC1Q13547 482 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-205ENST00000553474 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
SHMT2-205ENST00000553474 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
SHMT2-205ENST00000553474 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
SHMT2-205ENST00000553474 MSH6P52701 1360 aa16.44■□□□□ 0.22
SHMT2-205ENST00000553474 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHMT2-205ENST00000553474 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 TRIM27P14373 513 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 COG3Q96JB2 828 aa16.43■□□□□ 0.22
SHMT2-205ENST00000553474 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
SHMT2-205ENST00000553474 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
SHMT2-205ENST00000553474 IL13P35225 146 aa16.41■□□□□ 0.22
SHMT2-205ENST00000553474 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
SHMT2-205ENST00000553474 GNAI1P63096 354 aa16.41■□□□□ 0.22
SHMT2-205ENST00000553474 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
SHMT2-205ENST00000553474 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
SHMT2-205ENST00000553474 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
SHMT2-205ENST00000553474 UPF2Q9HAU5 1272 aaKnown RBP16.4■□□□□ 0.22
SHMT2-205ENST00000553474 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
SHMT2-205ENST00000553474 ATF3P18847 181 aa16.38■□□□□ 0.21
SHMT2-205ENST00000553474 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
SHMT2-205ENST00000553474 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
SHMT2-205ENST00000553474 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
SHMT2-205ENST00000553474 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
SHMT2-205ENST00000553474 DCCP43146 1447 aa16.38■□□□□ 0.21
SHMT2-205ENST00000553474 NME9Q86XW9 330 aa16.37■□□□□ 0.21
SHMT2-205ENST00000553474 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-205ENST00000553474 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 ZBTB40Q9NUA8 1239 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 BECN1Q14457 450 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 SMC5Q8IY18 1101 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
SHMT2-205ENST00000553474 USP19O94966 1318 aa16.35■□□□□ 0.21
SHMT2-205ENST00000553474 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
SHMT2-205ENST00000553474 MST1RQ04912 1400 aa16.34■□□□□ 0.21
SHMT2-205ENST00000553474 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
SHMT2-205ENST00000553474 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
SHMT2-205ENST00000553474 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
SHMT2-205ENST00000553474 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
SHMT2-205ENST00000553474 CERKQ8TCT0 537 aa16.33■□□□□ 0.21
SHMT2-205ENST00000553474 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.21
SHMT2-205ENST00000553474 PRR36Q9H6K5 1346 aa16.33■□□□□ 0.21
SHMT2-205ENST00000553474 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
SHMT2-205ENST00000553474 USP6P35125 1406 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 VAMP4O75379 141 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 HMOX1P09601 288 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
SHMT2-205ENST00000553474 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
SHMT2-205ENST00000553474 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
SHMT2-205ENST00000553474 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
SHMT2-205ENST00000553474 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
SHMT2-205ENST00000553474 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
SHMT2-205ENST00000553474 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
SHMT2-205ENST00000553474 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
SHMT2-205ENST00000553474 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
SHMT2-205ENST00000553474 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
SHMT2-205ENST00000553474 SSH2Q76I76 1423 aa16.29■□□□□ 0.2
SHMT2-205ENST00000553474 ACEP12821 1306 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 UBAP1LF5GYI3 381 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 FBLN1P23142 703 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 MBIPQ9NS73 344 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 ABCC4O15439 1325 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
SHMT2-205ENST00000553474 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
SHMT2-205ENST00000553474 NUCB1Q02818 461 aa16.27■□□□□ 0.2
SHMT2-205ENST00000553474 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms