RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SULT6B1Q6IMI4 303 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 AEBP1Q8IUX7 1158 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 MAP3K19Q56UN5 1328 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 USP31Q70CQ4 1352 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 AMPHP49418 695 aa11.72□□□□□ -0.53
RAB3IP-218ENST00000553099 ESCO1Q5FWF5 840 aa11.72□□□□□ -0.53
RAB3IP-218ENST00000553099 CLUAP1Q96AJ1 413 aa11.72□□□□□ -0.53
RAB3IP-218ENST00000553099 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
RAB3IP-218ENST00000553099 IL16Q14005 1332 aa11.71□□□□□ -0.53
RAB3IP-218ENST00000553099 PDE3AQ14432 1141 aa11.71□□□□□ -0.53
RAB3IP-218ENST00000553099 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
RAB3IP-218ENST00000553099 TNNQ9UQP3 1299 aa11.71□□□□□ -0.54
RAB3IP-218ENST00000553099 FLT4P35916 1363 aa11.7□□□□□ -0.54
RAB3IP-218ENST00000553099 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
RAB3IP-218ENST00000553099 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
RAB3IP-218ENST00000553099 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
RAB3IP-218ENST00000553099 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 PSME1Q06323 249 aa11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 PROSER2Q86WR7 435 aaPredicted RBP11.69□□□□□ -0.54
RAB3IP-218ENST00000553099 RLBP1P12271 317 aa11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 SSH1Q8WYL5 1049 aa11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 RGPD1P0DJD0 1748 aa11.68□□□□□ -0.54
RAB3IP-218ENST00000553099 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 ZKSCAN2Q63HK3 967 aa11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 ZBTB7CA1YPR0 619 aa11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 LTN1O94822 1766 aa11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 KDM2BQ8NHM5 1336 aa11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
RAB3IP-218ENST00000553099 NWD1Q149M9 1564 aa11.66□□□□□ -0.54
RAB3IP-218ENST00000553099 ELL2O00472 640 aaPredicted RBP11.66□□□□□ -0.54
RAB3IP-218ENST00000553099 GNAI1P63096 354 aa11.66□□□□□ -0.54
RAB3IP-218ENST00000553099 FOXO3O43524 673 aa11.66□□□□□ -0.54
RAB3IP-218ENST00000553099 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
RAB3IP-218ENST00000553099 TCERG1O14776 1098 aaKnown RBP11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 HSPA2P54652 639 aa11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 IFT57Q9NWB7 429 aa11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 HOXC9P31274 260 aa11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
RAB3IP-218ENST00000553099 ARHGEF10O15013 1369 aa11.65□□□□□ -0.55
RAB3IP-218ENST00000553099 MCM10Q7L590 875 aa11.64□□□□□ -0.55
RAB3IP-218ENST00000553099 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
RAB3IP-218ENST00000553099 TRIM27P14373 513 aa11.64□□□□□ -0.55
RAB3IP-218ENST00000553099 EYA1Q99502 592 aa11.64□□□□□ -0.55
RAB3IP-218ENST00000553099 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
RAB3IP-218ENST00000553099 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 KIF16BQ96L93 1317 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 RGS3P49796 1198 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 MVPQ14764 893 aaKnown RBP11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 ATF7IPQ6VMQ6 1270 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 ITPRIPQ8IWB1 547 aa11.63□□□□□ -0.55
RAB3IP-218ENST00000553099 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
RAB3IP-218ENST00000553099 IGHDP01880 384 aa11.62□□□□□ -0.55
RAB3IP-218ENST00000553099 MS4A1P11836 297 aa11.62□□□□□ -0.55
RAB3IP-218ENST00000553099 ZNF853P0CG23 659 aa11.62□□□□□ -0.55
RAB3IP-218ENST00000553099 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
RAB3IP-218ENST00000553099 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 MTHFSDQ2M296 383 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 ALDH1L2Q3SY69 923 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 C19orf44Q9H6X5 657 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 KDRP35968 1356 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 IPO8O15397 1037 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 VAMP4O75379 141 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-218ENST00000553099 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
RAB3IP-218ENST00000553099 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
RAB3IP-218ENST00000553099 ATF3P18847 181 aa11.6□□□□□ -0.55
RAB3IP-218ENST00000553099 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
RAB3IP-218ENST00000553099 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
RAB3IP-218ENST00000553099 C1orf167Q5SNV9 1468 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 NFAT5O94916 1531 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 PDE4AP27815 886 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 TMEM57Q8N5G2 664 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 RTL1A6NKG5 1358 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
RAB3IP-218ENST00000553099 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 AAMPQ13685 434 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 KRT28Q7Z3Y7 464 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 DDX19BQ9UMR2 479 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
RAB3IP-218ENST00000553099 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
RAB3IP-218ENST00000553099 IP6K1Q92551 441 aa11.57□□□□□ -0.56
RAB3IP-218ENST00000553099 GCP02774 474 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms