RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 C8orf34Q49A92 452 aa13.2□□□□□ -0.3
RFX4-210ENST00000552773 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
RFX4-210ENST00000552773 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
RFX4-210ENST00000552773 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
RFX4-210ENST00000552773 ACEP12821 1306 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 IGHDP01880 384 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 BECN1Q14457 450 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 FER1L4A9Z1Z3 1794 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 NRKQ7Z2Y5 1582 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
RFX4-210ENST00000552773 TRIM27P14373 513 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
RFX4-210ENST00000552773 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 BCL2L13Q9BXK5 485 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
RFX4-210ENST00000552773 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
RFX4-210ENST00000552773 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
RFX4-210ENST00000552773 LTKP29376 864 aa13.17□□□□□ -0.3
RFX4-210ENST00000552773 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
RFX4-210ENST00000552773 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
RFX4-210ENST00000552773 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
RFX4-210ENST00000552773 RLBP1P12271 317 aa13.16□□□□□ -0.3
RFX4-210ENST00000552773 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
RFX4-210ENST00000552773 HMOX1P09601 288 aa13.15□□□□□ -0.3
RFX4-210ENST00000552773 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
RFX4-210ENST00000552773 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
RFX4-210ENST00000552773 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.15□□□□□ -0.3
RFX4-210ENST00000552773 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.31
RFX4-210ENST00000552773 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.31
RFX4-210ENST00000552773 GCC1Q96CN9 775 aa13.15□□□□□ -0.31
RFX4-210ENST00000552773 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.31
RFX4-210ENST00000552773 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
RFX4-210ENST00000552773 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 PDZRN3Q9UPQ7 1066 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 FLT4P35916 1363 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
RFX4-210ENST00000552773 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
RFX4-210ENST00000552773 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
RFX4-210ENST00000552773 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
RFX4-210ENST00000552773 VAMP4O75379 141 aa13.13□□□□□ -0.31
RFX4-210ENST00000552773 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
RFX4-210ENST00000552773 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
RFX4-210ENST00000552773 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
RFX4-210ENST00000552773 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
RFX4-210ENST00000552773 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
RFX4-210ENST00000552773 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
RFX4-210ENST00000552773 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
RFX4-210ENST00000552773 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
RFX4-210ENST00000552773 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
RFX4-210ENST00000552773 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
RFX4-210ENST00000552773 XRN1Q8IZH2 1706 aaKnown RBP13.11□□□□□ -0.31
RFX4-210ENST00000552773 ANKLE2Q86XL3 938 aa13.11□□□□□ -0.31
RFX4-210ENST00000552773 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
RFX4-210ENST00000552773 PTPRCP08575 1304 aa13.1□□□□□ -0.31
RFX4-210ENST00000552773 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
RFX4-210ENST00000552773 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
RFX4-210ENST00000552773 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
RFX4-210ENST00000552773 AMPHP49418 695 aa13.09□□□□□ -0.31
RFX4-210ENST00000552773 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
RFX4-210ENST00000552773 ABCC4O15439 1325 aa13.08□□□□□ -0.32
RFX4-210ENST00000552773 RTL1A6NKG5 1358 aa13.08□□□□□ -0.32
RFX4-210ENST00000552773 CHL1O00533 1208 aa13.08□□□□□ -0.32
RFX4-210ENST00000552773 NUCB1Q02818 461 aa13.07□□□□□ -0.32
RFX4-210ENST00000552773 NBR1Q14596 966 aa13.07□□□□□ -0.32
RFX4-210ENST00000552773 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
RFX4-210ENST00000552773 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
RFX4-210ENST00000552773 KDRP35968 1356 aa13.07□□□□□ -0.32
RFX4-210ENST00000552773 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
RFX4-210ENST00000552773 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
RFX4-210ENST00000552773 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
RFX4-210ENST00000552773 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
RFX4-210ENST00000552773 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
RFX4-210ENST00000552773 TNNQ9UQP3 1299 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
RFX4-210ENST00000552773 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
RFX4-210ENST00000552773 FBLN1P23142 703 aa13.04□□□□□ -0.32
RFX4-210ENST00000552773 NLRP6P59044 892 aa13.04□□□□□ -0.32
RFX4-210ENST00000552773 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
RFX4-210ENST00000552773 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
RFX4-210ENST00000552773 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
RFX4-210ENST00000552773 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
RFX4-210ENST00000552773 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
RFX4-210ENST00000552773 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
RFX4-210ENST00000552773 HMMRO75330 724 aa13.02□□□□□ -0.32
RFX4-210ENST00000552773 CCT4P50991 539 aaKnown RBP13.02□□□□□ -0.33
RFX4-210ENST00000552773 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
RFX4-210ENST00000552773 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
RFX4-210ENST00000552773 STK31Q9BXU1 1019 aa13.02□□□□□ -0.33
RFX4-210ENST00000552773 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
RFX4-210ENST00000552773 KCNA6P17658 529 aa13.01□□□□□ -0.33
RFX4-210ENST00000552773 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms