RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
RAB3IP-215ENST00000551641 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
RAB3IP-215ENST00000551641 RTL5Q5HYW3 569 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-215ENST00000551641 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
RAB3IP-215ENST00000551641 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
RAB3IP-215ENST00000551641 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
RAB3IP-215ENST00000551641 U2SURPO15042 1029 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-215ENST00000551641 IGHDP01880 384 aa10.42□□□□□ -0.74
RAB3IP-215ENST00000551641 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-215ENST00000551641 NWD1Q149M9 1564 aa10.42□□□□□ -0.74
RAB3IP-215ENST00000551641 COL3A1P02461 1466 aaPredicted RBP10.41□□□□□ -0.74
RAB3IP-215ENST00000551641 MST1RQ04912 1400 aa10.41□□□□□ -0.74
RAB3IP-215ENST00000551641 USP6P35125 1406 aa10.41□□□□□ -0.74
RAB3IP-215ENST00000551641 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.74
RAB3IP-215ENST00000551641 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
RAB3IP-215ENST00000551641 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 RRP7AQ9Y3A4 280 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 FMN2Q9NZ56 1722 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 CDC42BPGQ6DT37 1551 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 AMPHP49418 695 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 NUTM2AQ8IVF1 878 aaPredicted RBP10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
RAB3IP-215ENST00000551641 ANKARQ7Z5J8 1434 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 TOM1O60784 492 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 RGS3P49796 1198 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 NEUROD2Q15784 382 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 PLEKHF1Q96S99 279 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 XIRP1Q702N8 1843 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 CHRNA2Q15822 529 aa10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-215ENST00000551641 NEFMP07197 916 aa10.37□□□□□ -0.75
RAB3IP-215ENST00000551641 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-215ENST00000551641 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
RAB3IP-215ENST00000551641 PNPLA6Q8IY17 1366 aa10.37□□□□□ -0.75
RAB3IP-215ENST00000551641 ITSN1Q15811 1721 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 HMOX1P09601 288 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 RLBP1P12271 317 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 POLKQ9UBT6 870 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 USP19O94966 1318 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
RAB3IP-215ENST00000551641 IL16Q14005 1332 aa10.35□□□□□ -0.75
RAB3IP-215ENST00000551641 ADAMTS2O95450 1211 aa10.35□□□□□ -0.75
RAB3IP-215ENST00000551641 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-215ENST00000551641 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
RAB3IP-215ENST00000551641 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 GCP02774 474 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 USHBP1Q8N6Y0 703 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
RAB3IP-215ENST00000551641 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-215ENST00000551641 TOPAZ1Q8N9V7 1692 aa10.33□□□□□ -0.76
RAB3IP-215ENST00000551641 MVPQ14764 893 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-215ENST00000551641 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 NCOA3Q9Y6Q9 1424 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 DCCP43146 1447 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 KIF20BQ96Q89 1820 aa10.32□□□□□ -0.76
RAB3IP-215ENST00000551641 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 NFKBIBQ15653 356 aa10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 SPATA31A3Q5VYP0 1347 aa10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 RWDD1Q9H446 243 aaPredicted RBP10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 AKAP12Q02952 1782 aa10.31□□□□□ -0.76
RAB3IP-215ENST00000551641 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 PRDM11Q9NQV5 511 aa10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 AEBP1Q8IUX7 1158 aa10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 MON2Q7Z3U7 1717 aa10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 SSH2Q76I76 1423 aa10.3□□□□□ -0.76
RAB3IP-215ENST00000551641 EXOSC9Q06265 439 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 AXIN2Q9Y2T1 843 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 SEC24BO95487 1268 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 EIF4A2Q14240 407 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 TSR2Q969E8 191 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 HSPA1LP34931 641 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 HDAC1Q13547 482 aaPredicted RBP10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 SULT6B1Q6IMI4 303 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 OVOS2A0A0J9YW53 1432 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 OVOS2Q6IE36 1432 aa10.29□□□□□ -0.76
RAB3IP-215ENST00000551641 PIK3C2AO00443 1686 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 FCHSD2O94868 740 aa10.28□□□□□ -0.76
RAB3IP-215ENST00000551641 TRIM27P14373 513 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms