RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
CACNB3-219ENST00000551544 METP08581 1390 aa16.39■□□□□ 0.21
CACNB3-219ENST00000551544 TSPOAP1O95153 1857 aa16.39■□□□□ 0.21
CACNB3-219ENST00000551544 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-219ENST00000551544 IFT57Q9NWB7 429 aa16.39■□□□□ 0.21
CACNB3-219ENST00000551544 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
CACNB3-219ENST00000551544 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
CACNB3-219ENST00000551544 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
CACNB3-219ENST00000551544 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
CACNB3-219ENST00000551544 BRPF1P55201 1214 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-219ENST00000551544 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-219ENST00000551544 DCTN1Q14203 1278 aa16.37■□□□□ 0.21
CACNB3-219ENST00000551544 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-219ENST00000551544 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
CACNB3-219ENST00000551544 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
CACNB3-219ENST00000551544 ESF1Q9H501 851 aaKnown RBP16.36■□□□□ 0.21
CACNB3-219ENST00000551544 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
CACNB3-219ENST00000551544 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
CACNB3-219ENST00000551544 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 RIMBP3CA6NJZ7 1639 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 RIMBP3BA6NNM3 1639 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 RIMBP3Q9UFD9 1639 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNB3-219ENST00000551544 HSCBQ8IWL3 235 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 FAM43AQ8N2R8 423 aa16.35■□□□□ 0.21
CACNB3-219ENST00000551544 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
CACNB3-219ENST00000551544 AGLP35573 1532 aa16.34■□□□□ 0.21
CACNB3-219ENST00000551544 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
CACNB3-219ENST00000551544 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
CACNB3-219ENST00000551544 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-219ENST00000551544 SETD1AO15047 1707 aaKnown RBP16.34■□□□□ 0.21
CACNB3-219ENST00000551544 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.21
CACNB3-219ENST00000551544 GCC1Q96CN9 775 aa16.33■□□□□ 0.21
CACNB3-219ENST00000551544 CPS1P31327 1500 aa16.33■□□□□ 0.2
CACNB3-219ENST00000551544 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
CACNB3-219ENST00000551544 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 CHMP5Q9NZZ3 219 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 DIP2BQ9P265 1576 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 ABCC4O15439 1325 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 BMP2KLQ5H9B9 411 aa16.32■□□□□ 0.2
CACNB3-219ENST00000551544 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
CACNB3-219ENST00000551544 MCM4P33991 863 aa16.31■□□□□ 0.2
CACNB3-219ENST00000551544 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
CACNB3-219ENST00000551544 ARXQ96QS3 562 aa16.31■□□□□ 0.2
CACNB3-219ENST00000551544 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
CACNB3-219ENST00000551544 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
CACNB3-219ENST00000551544 REREQ9P2R6 1566 aa16.3■□□□□ 0.2
CACNB3-219ENST00000551544 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
CACNB3-219ENST00000551544 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
CACNB3-219ENST00000551544 SULT6B1Q6IMI4 303 aa16.3■□□□□ 0.2
CACNB3-219ENST00000551544 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-219ENST00000551544 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
CACNB3-219ENST00000551544 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-219ENST00000551544 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
CACNB3-219ENST00000551544 SOX12O15370 315 aa16.28■□□□□ 0.2
CACNB3-219ENST00000551544 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
CACNB3-219ENST00000551544 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
CACNB3-219ENST00000551544 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
CACNB3-219ENST00000551544 MCM10Q7L590 875 aa16.26■□□□□ 0.19
CACNB3-219ENST00000551544 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
CACNB3-219ENST00000551544 SIRT1Q96EB6 747 aa16.26■□□□□ 0.19
CACNB3-219ENST00000551544 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
CACNB3-219ENST00000551544 SNX21Q969T3 373 aa16.25■□□□□ 0.19
CACNB3-219ENST00000551544 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
CACNB3-219ENST00000551544 L1TD1Q5T7N2 865 aaKnown RBP16.24■□□□□ 0.19
CACNB3-219ENST00000551544 ACEP12821 1306 aa16.24■□□□□ 0.19
CACNB3-219ENST00000551544 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
CACNB3-219ENST00000551544 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
CACNB3-219ENST00000551544 TRAK2O60296 914 aa16.23■□□□□ 0.19
CACNB3-219ENST00000551544 KIF2CQ99661 725 aa16.23■□□□□ 0.19
CACNB3-219ENST00000551544 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
CACNB3-219ENST00000551544 TECPR2O15040 1411 aa16.23■□□□□ 0.19
CACNB3-219ENST00000551544 TNRQ92752 1358 aa16.23■□□□□ 0.19
CACNB3-219ENST00000551544 HSP90AA1P07900 732 aaKnown RBP16.23■□□□□ 0.19
CACNB3-219ENST00000551544 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
CACNB3-219ENST00000551544 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
CACNB3-219ENST00000551544 C3P01024 1663 aa16.22■□□□□ 0.19
CACNB3-219ENST00000551544 TMEM2Q9UHN6 1383 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 CDC45O75419 566 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 C16orf71Q8IYS4 520 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-219ENST00000551544 APBB1O00213 710 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 CHL1O00533 1208 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.19
CACNB3-219ENST00000551544 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
CACNB3-219ENST00000551544 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
CACNB3-219ENST00000551544 ITSN1Q15811 1721 aa16.21■□□□□ 0.18
CACNB3-219ENST00000551544 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
CACNB3-219ENST00000551544 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
CACNB3-219ENST00000551544 DDIT3P35638 169 aa16.2■□□□□ 0.18
CACNB3-219ENST00000551544 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
CACNB3-219ENST00000551544 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-219ENST00000551544 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
CACNB3-219ENST00000551544 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
CACNB3-219ENST00000551544 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
CACNB3-219ENST00000551544 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
CACNB3-219ENST00000551544 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
CACNB3-219ENST00000551544 LTKP29376 864 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms