RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NEFMP07197 916 aa14.91□□□□□ -0.02
RAB5C-208ENST00000551338 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-208ENST00000551338 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
RAB5C-208ENST00000551338 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
RAB5C-208ENST00000551338 NFAT5O94916 1531 aa14.91□□□□□ -0.02
RAB5C-208ENST00000551338 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
RAB5C-208ENST00000551338 XIRP1Q702N8 1843 aaKnown RBP14.9□□□□□ -0.02
RAB5C-208ENST00000551338 ARHGEF10O15013 1369 aa14.9□□□□□ -0.02
RAB5C-208ENST00000551338 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
RAB5C-208ENST00000551338 LRRC37A3O60309 1634 aa14.89□□□□□ -0.03
RAB5C-208ENST00000551338 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
RAB5C-208ENST00000551338 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
RAB5C-208ENST00000551338 HSP90AB2PQ58FF8 381 aa14.88□□□□□ -0.03
RAB5C-208ENST00000551338 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
RAB5C-208ENST00000551338 TNNQ9UQP3 1299 aa14.88□□□□□ -0.03
RAB5C-208ENST00000551338 ALS2Q96Q42 1657 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 SOX12O15370 315 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
RAB5C-208ENST00000551338 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 SLIT3O75094 1523 aa14.87□□□□□ -0.03
RAB5C-208ENST00000551338 FRAT1Q92837 279 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-208ENST00000551338 THUMPD2Q9BTF0 503 aaKnown RBP14.86□□□□□ -0.03
RAB5C-208ENST00000551338 NLRP6P59044 892 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 LMOD3Q0VAK6 560 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 CENPQQ7L2Z9 268 aaPredicted RBP14.85□□□□□ -0.03
RAB5C-208ENST00000551338 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 RTL1A6NKG5 1358 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 KDRP35968 1356 aa14.85□□□□□ -0.03
RAB5C-208ENST00000551338 RGPD5Q99666 1765 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 TCERG1O14776 1098 aaKnown RBP14.84□□□□□ -0.03
RAB5C-208ENST00000551338 ZNF853P0CG23 659 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 RLBP1P12271 317 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
RAB5C-208ENST00000551338 IFT57Q9NWB7 429 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 IGSF1Q8N6C5 1336 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 CAMTA1Q9Y6Y1 1673 aa14.84□□□□□ -0.03
RAB5C-208ENST00000551338 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.04
RAB5C-208ENST00000551338 AMPHP49418 695 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 GNAI1P63096 354 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 NUTM2GQ5VZR2 741 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
RAB5C-208ENST00000551338 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
RAB5C-208ENST00000551338 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
RAB5C-208ENST00000551338 HOXC9P31274 260 aa14.81□□□□□ -0.04
RAB5C-208ENST00000551338 ABTB2Q8N961 1025 aa14.81□□□□□ -0.04
RAB5C-208ENST00000551338 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
RAB5C-208ENST00000551338 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
RAB5C-208ENST00000551338 ALDH1L2Q3SY69 923 aa14.8□□□□□ -0.04
RAB5C-208ENST00000551338 ESCO1Q5FWF5 840 aa14.8□□□□□ -0.04
RAB5C-208ENST00000551338 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
RAB5C-208ENST00000551338 PROSER2Q86WR7 435 aaPredicted RBP14.8□□□□□ -0.04
RAB5C-208ENST00000551338 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
RAB5C-208ENST00000551338 MS4A1P11836 297 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 DCCP43146 1447 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 MST1RQ04912 1400 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 DCTN1Q14203 1278 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 EYA1Q99502 592 aa14.79□□□□□ -0.04
RAB5C-208ENST00000551338 FAM208AQ9UK61 1670 aaKnown RBP14.79□□□□□ -0.04
RAB5C-208ENST00000551338 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
RAB5C-208ENST00000551338 CRB1P82279 1406 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 TRIM27P14373 513 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 AAMPQ13685 434 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 MVPQ14764 893 aaKnown RBP14.78□□□□□ -0.04
RAB5C-208ENST00000551338 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
RAB5C-208ENST00000551338 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 ORAI2Q96SN7 254 aa14.78□□□□□ -0.04
RAB5C-208ENST00000551338 NCOA3Q9Y6Q9 1424 aa14.77□□□□□ -0.04
RAB5C-208ENST00000551338 VAMP4O75379 141 aa14.77□□□□□ -0.05
RAB5C-208ENST00000551338 BRPF1P55201 1214 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-208ENST00000551338 MED1Q15648 1581 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-208ENST00000551338 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 IGHDP01880 384 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 PSME1Q06323 249 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 ATF7IPQ6VMQ6 1270 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
RAB5C-208ENST00000551338 CACNA1FO60840 1977 aa14.76□□□□□ -0.05
RAB5C-208ENST00000551338 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
RAB5C-208ENST00000551338 USP19O94966 1318 aa14.75□□□□□ -0.05
RAB5C-208ENST00000551338 MRPL50Q8N5N7 158 aaKnown RBP14.75□□□□□ -0.05
RAB5C-208ENST00000551338 COL18A1P39060 1754 aa14.75□□□□□ -0.05
RAB5C-208ENST00000551338 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
RAB5C-208ENST00000551338 N4BP2Q86UW6 1770 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-208ENST00000551338 MSH6P52701 1360 aa14.74□□□□□ -0.05
RAB5C-208ENST00000551338 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
RAB5C-208ENST00000551338 FTSJ3Q8IY81 847 aaKnown RBP14.74□□□□□ -0.05
RAB5C-208ENST00000551338 PCDHB15Q9Y5E8 787 aa14.74□□□□□ -0.05
RAB5C-208ENST00000551338 NCAPD2Q15021 1401 aa14.74□□□□□ -0.05
RAB5C-208ENST00000551338 TWISTNBQ3B726 338 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-208ENST00000551338 MCM10Q7L590 875 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms