RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 USP26Q9BXU7 913 aa15.02□□□□□ -0.01
ERBB3-219ENST00000551242 MAP3K4Q9Y6R4 1608 aa15.02□□□□□ -0.01
ERBB3-219ENST00000551242 SBNO2Q9Y2G9 1366 aa15.02□□□□□ -0.01
ERBB3-219ENST00000551242 CHGAP10645 457 aaKnown RBP15.02□□□□□ -0.01
ERBB3-219ENST00000551242 C16orf71Q8IYS4 520 aaPredicted RBP15.02□□□□□ -0.01
ERBB3-219ENST00000551242 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
ERBB3-219ENST00000551242 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
ERBB3-219ENST00000551242 CBX1P83916 185 aa15.01□□□□□ -0.01
ERBB3-219ENST00000551242 KIAA2012Q0VF49 1180 aa15.01□□□□□ -0.01
ERBB3-219ENST00000551242 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
ERBB3-219ENST00000551242 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
ERBB3-219ENST00000551242 ZNF710Q8N1W2 664 aa15.01□□□□□ -0.01
ERBB3-219ENST00000551242 C17orf53Q8N3J3 647 aaPredicted RBP15□□□□□ -0.01
ERBB3-219ENST00000551242 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
ERBB3-219ENST00000551242 MYRIPQ8NFW9 859 aa15□□□□□ -0.01
ERBB3-219ENST00000551242 GGNBP2Q9H3C7 697 aa15□□□□□ -0.01
ERBB3-219ENST00000551242 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
ERBB3-219ENST00000551242 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
ERBB3-219ENST00000551242 IL16Q14005 1332 aa14.99□□□□□ -0.01
ERBB3-219ENST00000551242 OTUD7AQ8TE49 926 aaPredicted RBP14.99□□□□□ -0.01
ERBB3-219ENST00000551242 KIF3BO15066 747 aa14.98□□□□□ -0.01
ERBB3-219ENST00000551242 FOXD4L6Q3SYB3 417 aaPredicted RBP14.98□□□□□ -0.01
ERBB3-219ENST00000551242 FOXD4L3Q6VB84 417 aaPredicted RBP14.98□□□□□ -0.01
ERBB3-219ENST00000551242 TSPYL6Q8N831 410 aa14.98□□□□□ -0.01
ERBB3-219ENST00000551242 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
ERBB3-219ENST00000551242 ST18O60284 1047 aa14.97□□□□□ -0.01
ERBB3-219ENST00000551242 UTP14CQ5TAP6 766 aaKnown RBP14.97□□□□□ -0.01
ERBB3-219ENST00000551242 MED14O60244 1454 aa14.97□□□□□ -0.01
ERBB3-219ENST00000551242 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
ERBB3-219ENST00000551242 MYOM2P54296 1465 aa14.97□□□□□ -0.01
ERBB3-219ENST00000551242 APBB1O00213 710 aa14.96□□□□□ -0.01
ERBB3-219ENST00000551242 SAFB2Q14151 953 aaKnown RBP eCLIP14.96□□□□□ -0.01
ERBB3-219ENST00000551242 TTC22Q5TAA0 569 aa14.96□□□□□ -0.01
ERBB3-219ENST00000551242 ATP2B3Q16720 1220 aa14.96□□□□□ -0.01
ERBB3-219ENST00000551242 TSPY26PQ9H489 355 aa14.96□□□□□ -0.01
ERBB3-219ENST00000551242 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.02
ERBB3-219ENST00000551242 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
ERBB3-219ENST00000551242 PPP4R3BQ5MIZ7 849 aa14.95□□□□□ -0.02
ERBB3-219ENST00000551242 TTC12Q9H892 705 aaPredicted RBP14.95□□□□□ -0.02
ERBB3-219ENST00000551242 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
ERBB3-219ENST00000551242 INTS3Q68E01 1043 aaKnown RBP14.95□□□□□ -0.02
ERBB3-219ENST00000551242 VAMP4O75379 141 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 GDPD2Q9HCC8 539 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 ASXL2Q76L83 1435 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 MBD3O95983 291 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 SDSP20132 328 aa14.94□□□□□ -0.02
ERBB3-219ENST00000551242 NOLC1Q14978 699 aaKnown RBP eCLIP14.94□□□□□ -0.021e-6■■□□□ 11.8
ERBB3-219ENST00000551242 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
ERBB3-219ENST00000551242 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
ERBB3-219ENST00000551242 NOL8Q76FK4 1167 aaKnown RBP14.93□□□□□ -0.02
ERBB3-219ENST00000551242 ANKRD36BQ8N2N9 1353 aa14.93□□□□□ -0.02
ERBB3-219ENST00000551242 SMARCA5O60264 1052 aaPredicted RBP14.93□□□□□ -0.02
ERBB3-219ENST00000551242 USP25Q9UHP3 1055 aa14.93□□□□□ -0.02
ERBB3-219ENST00000551242 QRICH2Q9H0J4 1663 aa14.93□□□□□ -0.02
ERBB3-219ENST00000551242 TET3O43151 1660 aa14.92□□□□□ -0.02
ERBB3-219ENST00000551242 PPRC1Q5VV67 1664 aaKnown RBP14.92□□□□□ -0.02
ERBB3-219ENST00000551242 PIBF1Q8WXW3 757 aa14.92□□□□□ -0.02
ERBB3-219ENST00000551242 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
ERBB3-219ENST00000551242 FANCAO15360 1455 aa14.92□□□□□ -0.02
ERBB3-219ENST00000551242 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
ERBB3-219ENST00000551242 PRIMPOLQ96LW4 560 aa14.92□□□□□ -0.02
ERBB3-219ENST00000551242 GADD45BO75293 160 aaPredicted RBP14.91□□□□□ -0.02
ERBB3-219ENST00000551242 NEK4P51957 841 aa14.91□□□□□ -0.02
ERBB3-219ENST00000551242 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
ERBB3-219ENST00000551242 DIAPH1O60610 1272 aaKnown RBP14.91□□□□□ -0.02
ERBB3-219ENST00000551242 IGSF3O75054 1194 aa14.91□□□□□ -0.02
ERBB3-219ENST00000551242 TMX3Q96JJ7 454 aa14.91□□□□□ -0.02
ERBB3-219ENST00000551242 NSD2O96028 1365 aa14.91□□□□□ -0.02
ERBB3-219ENST00000551242 BRPF1P55201 1214 aaPredicted RBP14.9□□□□□ -0.02
ERBB3-219ENST00000551242 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 DCTPP1Q9H773 170 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 C14orf93Q9H972 538 aaKnown RBP14.9□□□□□ -0.02
ERBB3-219ENST00000551242 KIF3AQ9Y496 699 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 ABCC4O15439 1325 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 PRKAR2BP31323 418 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
ERBB3-219ENST00000551242 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 COL3A1P02461 1466 aaPredicted RBP14.9□□□□□ -0.02
ERBB3-219ENST00000551242 FBLN1P23142 703 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 BCL2L12Q9HB09 334 aa14.9□□□□□ -0.02
ERBB3-219ENST00000551242 ABCC1P33527 1531 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 MROH2AA6NES4 1674 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 FGD1P98174 961 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 PTCH1Q13635 1447 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 BRD1O95696 1058 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 GTF2F1P35269 517 aaKnown RBP eCLIP14.89□□□□□ -0.033e-8■■■□□ 17.7
ERBB3-219ENST00000551242 CASC1Q6TDU7 716 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 A0A1W2PP64 1363 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
ERBB3-219ENST00000551242 ADCY5O95622 1261 aa14.88□□□□□ -0.03
ERBB3-219ENST00000551242 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
ERBB3-219ENST00000551242 KIF1BO60333 1816 aa14.88□□□□□ -0.03
ERBB3-219ENST00000551242 GTPBP4Q9BZE4 634 aaKnown RBP14.88□□□□□ -0.03
ERBB3-219ENST00000551242 INO80Q9ULG1 1556 aaPredicted RBP14.87□□□□□ -0.03
ERBB3-219ENST00000551242 FYB1O15117 783 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 REC8O95072 547 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 HMOX1P09601 288 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms