RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 FNBP4Q8N3X1 1017 aaPredicted RBP15.92■□□□□ 0.14
PRIM1-206ENST00000550770 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
PRIM1-206ENST00000550770 NGDNQ8NEJ9 315 aaKnown RBP15.91■□□□□ 0.14
PRIM1-206ENST00000550770 CABLES1Q8TDN4 633 aa15.9■□□□□ 0.14
PRIM1-206ENST00000550770 USP21Q9UK80 565 aa15.9■□□□□ 0.14
PRIM1-206ENST00000550770 BCL9LQ86UU0 1499 aa15.9■□□□□ 0.14
PRIM1-206ENST00000550770 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
PRIM1-206ENST00000550770 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 RXRBP28702 533 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
PRIM1-206ENST00000550770 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 QTRT2Q9H974 415 aaKnown RBP15.89■□□□□ 0.13
PRIM1-206ENST00000550770 CABP2Q9NPB3 220 aa15.89■□□□□ 0.13
PRIM1-206ENST00000550770 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
PRIM1-206ENST00000550770 PLCG2P16885 1265 aa15.88■□□□□ 0.13
PRIM1-206ENST00000550770 ACEP12821 1306 aa15.88■□□□□ 0.13
PRIM1-206ENST00000550770 SLIT2O94813 1529 aa15.88■□□□□ 0.13
PRIM1-206ENST00000550770 ATRNO75882 1429 aa15.87■□□□□ 0.13
PRIM1-206ENST00000550770 RGL2O15211 777 aa15.87■□□□□ 0.13
PRIM1-206ENST00000550770 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
PRIM1-206ENST00000550770 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
PRIM1-206ENST00000550770 RGS12O14924 1447 aa15.86■□□□□ 0.13
PRIM1-206ENST00000550770 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.86■□□□□ 0.13
PRIM1-206ENST00000550770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-206ENST00000550770 RBM6P78332 1123 aaKnown RBP15.86■□□□□ 0.13
PRIM1-206ENST00000550770 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-206ENST00000550770 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
PRIM1-206ENST00000550770 HAP1P54257 671 aaPredicted RBP15.85■□□□□ 0.13
PRIM1-206ENST00000550770 TRPC5Q9UL62 973 aaPredicted RBP15.85■□□□□ 0.13
PRIM1-206ENST00000550770 COLQQ9Y215 455 aaPredicted RBP15.85■□□□□ 0.13
PRIM1-206ENST00000550770 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
PRIM1-206ENST00000550770 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
PRIM1-206ENST00000550770 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
PRIM1-206ENST00000550770 OCEL1Q9H607 264 aa15.83■□□□□ 0.12
PRIM1-206ENST00000550770 PHRF1Q9P1Y6 1649 aaKnown RBP15.83■□□□□ 0.12
PRIM1-206ENST00000550770 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
PRIM1-206ENST00000550770 CLSPNQ9HAW4 1339 aa15.82■□□□□ 0.12
PRIM1-206ENST00000550770 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
PRIM1-206ENST00000550770 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
PRIM1-206ENST00000550770 USP6P35125 1406 aa15.81■□□□□ 0.12
PRIM1-206ENST00000550770 UNC5CLQ8IV45 518 aa15.81■□□□□ 0.12
PRIM1-206ENST00000550770 GLI3P10071 1580 aa15.8■□□□□ 0.12
PRIM1-206ENST00000550770 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
PRIM1-206ENST00000550770 NRAPQ86VF7 1730 aa15.8■□□□□ 0.12
PRIM1-206ENST00000550770 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
PRIM1-206ENST00000550770 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
PRIM1-206ENST00000550770 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
PRIM1-206ENST00000550770 ATAD2Q6PL18 1390 aa15.79■□□□□ 0.12
PRIM1-206ENST00000550770 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
PRIM1-206ENST00000550770 MAMSTRQ6ZN01 415 aa15.79■□□□□ 0.12
PRIM1-206ENST00000550770 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
PRIM1-206ENST00000550770 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
PRIM1-206ENST00000550770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■□□□□ 8.8
PRIM1-206ENST00000550770 USP19O94966 1318 aa15.77■□□□□ 0.12
PRIM1-206ENST00000550770 AKAP12Q02952 1782 aa15.77■□□□□ 0.11
PRIM1-206ENST00000550770 STK25O00506 426 aa15.76■□□□□ 0.11
PRIM1-206ENST00000550770 ABTB2Q8N961 1025 aa15.76■□□□□ 0.11
PRIM1-206ENST00000550770 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
PRIM1-206ENST00000550770 TIMELESSQ9UNS1 1208 aa15.76■□□□□ 0.11
PRIM1-206ENST00000550770 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
PRIM1-206ENST00000550770 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
PRIM1-206ENST00000550770 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
PRIM1-206ENST00000550770 VPS72Q15906 364 aa15.75■□□□□ 0.11
PRIM1-206ENST00000550770 TESK2Q96S53 571 aa15.75■□□□□ 0.11
PRIM1-206ENST00000550770 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
PRIM1-206ENST00000550770 CD163L1Q9NR16 1453 aa15.74■□□□□ 0.11
PRIM1-206ENST00000550770 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
PRIM1-206ENST00000550770 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
PRIM1-206ENST00000550770 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
PRIM1-206ENST00000550770 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
PRIM1-206ENST00000550770 EFCAB3Q8N7B9 438 aa15.73■□□□□ 0.11
PRIM1-206ENST00000550770 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRIM1-206ENST00000550770 USP47Q96K76 1375 aa15.73■□□□□ 0.11
PRIM1-206ENST00000550770 SLIT3O75094 1523 aa15.73■□□□□ 0.11
PRIM1-206ENST00000550770 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
PRIM1-206ENST00000550770 SCUBE2Q9NQ36 999 aa15.72■□□□□ 0.11
PRIM1-206ENST00000550770 CPDO75976 1380 aa15.72■□□□□ 0.11
PRIM1-206ENST00000550770 TTC21BQ7Z4L5 1316 aa15.71■□□□□ 0.11
PRIM1-206ENST00000550770 LMO7Q8WWI1 1683 aa15.71■□□□□ 0.11
PRIM1-206ENST00000550770 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
PRIM1-206ENST00000550770 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
PRIM1-206ENST00000550770 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
PRIM1-206ENST00000550770 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
PRIM1-206ENST00000550770 NLRP6P59044 892 aa15.7■□□□□ 0.1
PRIM1-206ENST00000550770 PUS7Q96PZ0 661 aaKnown RBP15.7■□□□□ 0.1
PRIM1-206ENST00000550770 CCDC9Q9Y3X0 531 aaKnown RBP15.7■□□□□ 0.1
PRIM1-206ENST00000550770 GCP02774 474 aa15.69■□□□□ 0.1
PRIM1-206ENST00000550770 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 CAMTA1Q9Y6Y1 1673 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 SOX12O15370 315 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
PRIM1-206ENST00000550770 PDCD7Q8N8D1 485 aaKnown RBP15.68■□□□□ 0.1
PRIM1-206ENST00000550770 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 EP400Q96L91 3159 aa15.68■□□□□ 0.1
PRIM1-206ENST00000550770 SPATA31A5Q5VU36 1347 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms