RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 KDRP35968 1356 aa16.5■□□□□ 0.23
LINC02407-201ENST00000550380 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
LINC02407-201ENST00000550380 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
LINC02407-201ENST00000550380 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC02407-201ENST00000550380 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
LINC02407-201ENST00000550380 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
LINC02407-201ENST00000550380 PPM1GO15355 546 aaPredicted RBP16.48■□□□□ 0.23
LINC02407-201ENST00000550380 HOXC9P31274 260 aa16.48■□□□□ 0.23
LINC02407-201ENST00000550380 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
LINC02407-201ENST00000550380 CERKQ8TCT0 537 aa16.47■□□□□ 0.23
LINC02407-201ENST00000550380 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
LINC02407-201ENST00000550380 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
LINC02407-201ENST00000550380 ADRA2BP18089 450 aa16.46■□□□□ 0.23
LINC02407-201ENST00000550380 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
LINC02407-201ENST00000550380 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
LINC02407-201ENST00000550380 COL18A1P39060 1754 aa16.46■□□□□ 0.22
LINC02407-201ENST00000550380 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
LINC02407-201ENST00000550380 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
LINC02407-201ENST00000550380 U2SURPO15042 1029 aaKnown RBP16.44■□□□□ 0.22
LINC02407-201ENST00000550380 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
LINC02407-201ENST00000550380 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
LINC02407-201ENST00000550380 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
LINC02407-201ENST00000550380 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
LINC02407-201ENST00000550380 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
LINC02407-201ENST00000550380 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
LINC02407-201ENST00000550380 COL14A1Q05707 1796 aaKnown RBP16.42■□□□□ 0.22
LINC02407-201ENST00000550380 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
LINC02407-201ENST00000550380 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
LINC02407-201ENST00000550380 ZNF521Q96K83 1311 aa16.41■□□□□ 0.22
LINC02407-201ENST00000550380 FBLN1P23142 703 aa16.4■□□□□ 0.22
LINC02407-201ENST00000550380 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
LINC02407-201ENST00000550380 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
LINC02407-201ENST00000550380 ERBB3P21860 1342 aa16.4■□□□□ 0.22
LINC02407-201ENST00000550380 MSH5O43196 834 aa16.39■□□□□ 0.21
LINC02407-201ENST00000550380 WDR63Q8IWG1 891 aa16.39■□□□□ 0.21
LINC02407-201ENST00000550380 TCP11L2Q8N4U5 519 aa16.39■□□□□ 0.21
LINC02407-201ENST00000550380 APAF1O14727 1248 aa16.38■□□□□ 0.21
LINC02407-201ENST00000550380 SOX12O15370 315 aa16.38■□□□□ 0.21
LINC02407-201ENST00000550380 IL16Q14005 1332 aa16.38■□□□□ 0.21
LINC02407-201ENST00000550380 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
LINC02407-201ENST00000550380 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
LINC02407-201ENST00000550380 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
LINC02407-201ENST00000550380 JCADQ9P266 1359 aa16.37■□□□□ 0.21
LINC02407-201ENST00000550380 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
LINC02407-201ENST00000550380 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
LINC02407-201ENST00000550380 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
LINC02407-201ENST00000550380 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
LINC02407-201ENST00000550380 EYA1Q99502 592 aa16.36■□□□□ 0.21
LINC02407-201ENST00000550380 E9PSI1 815 aa16.35■□□□□ 0.21
LINC02407-201ENST00000550380 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
LINC02407-201ENST00000550380 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
LINC02407-201ENST00000550380 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
LINC02407-201ENST00000550380 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
LINC02407-201ENST00000550380 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
LINC02407-201ENST00000550380 AMOTQ4VCS5 1084 aa16.34■□□□□ 0.21
LINC02407-201ENST00000550380 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
LINC02407-201ENST00000550380 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
LINC02407-201ENST00000550380 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
LINC02407-201ENST00000550380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC02407-201ENST00000550380 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
LINC02407-201ENST00000550380 COL5A2P05997 1499 aaPredicted RBP16.34■□□□□ 0.21
LINC02407-201ENST00000550380 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.21
LINC02407-201ENST00000550380 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
LINC02407-201ENST00000550380 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
LINC02407-201ENST00000550380 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
LINC02407-201ENST00000550380 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
LINC02407-201ENST00000550380 HMOX1P09601 288 aa16.31■□□□□ 0.2
LINC02407-201ENST00000550380 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
LINC02407-201ENST00000550380 PLCH1Q4KWH8 1693 aa16.3■□□□□ 0.2
LINC02407-201ENST00000550380 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
LINC02407-201ENST00000550380 RIPK4P57078 832 aa16.3■□□□□ 0.2
LINC02407-201ENST00000550380 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
LINC02407-201ENST00000550380 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
LINC02407-201ENST00000550380 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
LINC02407-201ENST00000550380 RGPD2P0DJD1 1756 aa16.3■□□□□ 0.2
LINC02407-201ENST00000550380 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
LINC02407-201ENST00000550380 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
LINC02407-201ENST00000550380 CRB1P82279 1406 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 SLFN5Q08AF3 891 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 CARD10Q9BWT7 1032 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
LINC02407-201ENST00000550380 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
LINC02407-201ENST00000550380 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
LINC02407-201ENST00000550380 PHACTR3Q96KR7 559 aa16.27■□□□□ 0.2
LINC02407-201ENST00000550380 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.27■□□□□ 0.19
LINC02407-201ENST00000550380 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
LINC02407-201ENST00000550380 NRAPQ86VF7 1730 aa16.26■□□□□ 0.19
LINC02407-201ENST00000550380 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
LINC02407-201ENST00000550380 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
LINC02407-201ENST00000550380 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
LINC02407-201ENST00000550380 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
LINC02407-201ENST00000550380 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
LINC02407-201ENST00000550380 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
LINC02407-201ENST00000550380 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
LINC02407-201ENST00000550380 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
LINC02407-201ENST00000550380 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
LINC02407-201ENST00000550380 GNAI1P63096 354 aa16.24■□□□□ 0.19
LINC02407-201ENST00000550380 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms