RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
TMEM116-209ENST00000550020 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
TMEM116-209ENST00000550020 OVOS2A0A0J9YW53 1432 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 TRIM27P14373 513 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 C8orf34Q49A92 452 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 ITPRIPQ8IWB1 547 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
TMEM116-209ENST00000550020 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 NRKQ7Z2Y5 1582 aa11.35□□□□□ -0.59
TMEM116-209ENST00000550020 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
TMEM116-209ENST00000550020 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
TMEM116-209ENST00000550020 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
TMEM116-209ENST00000550020 HMOX1P09601 288 aa11.34□□□□□ -0.59
TMEM116-209ENST00000550020 RLBP1P12271 317 aa11.34□□□□□ -0.59
TMEM116-209ENST00000550020 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
TMEM116-209ENST00000550020 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
TMEM116-209ENST00000550020 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
TMEM116-209ENST00000550020 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-209ENST00000550020 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
TMEM116-209ENST00000550020 LAS1LQ9Y4W2 734 aaKnown RBP11.33□□□□□ -0.6
TMEM116-209ENST00000550020 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-209ENST00000550020 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-209ENST00000550020 BECN1Q14457 450 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 PCDHB15Q9Y5E8 787 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 SSH2Q76I76 1423 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 PTPRUQ92729 1446 aa11.32□□□□□ -0.6
TMEM116-209ENST00000550020 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
TMEM116-209ENST00000550020 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
TMEM116-209ENST00000550020 FLT4P35916 1363 aa11.31□□□□□ -0.6
TMEM116-209ENST00000550020 VAMP4O75379 141 aa11.31□□□□□ -0.6
TMEM116-209ENST00000550020 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
TMEM116-209ENST00000550020 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
TMEM116-209ENST00000550020 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
TMEM116-209ENST00000550020 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
TMEM116-209ENST00000550020 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
TMEM116-209ENST00000550020 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-209ENST00000550020 ANKLE2Q86XL3 938 aa11.3□□□□□ -0.6
TMEM116-209ENST00000550020 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
TMEM116-209ENST00000550020 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
TMEM116-209ENST00000550020 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
TMEM116-209ENST00000550020 KIAA0232Q92628 1395 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
TMEM116-209ENST00000550020 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-209ENST00000550020 SULT6B1Q6IMI4 303 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 SMC5Q8IY18 1101 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
TMEM116-209ENST00000550020 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
TMEM116-209ENST00000550020 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
TMEM116-209ENST00000550020 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-209ENST00000550020 AMPHP49418 695 aa11.28□□□□□ -0.6
TMEM116-209ENST00000550020 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
TMEM116-209ENST00000550020 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
TMEM116-209ENST00000550020 SOS1Q07889 1333 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-209ENST00000550020 FBLN1P23142 703 aa11.27□□□□□ -0.61
TMEM116-209ENST00000550020 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
TMEM116-209ENST00000550020 CHMP4AQ9BY43 222 aa11.27□□□□□ -0.61
TMEM116-209ENST00000550020 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
TMEM116-209ENST00000550020 CHL1O00533 1208 aa11.26□□□□□ -0.61
TMEM116-209ENST00000550020 ABCC4O15439 1325 aa11.26□□□□□ -0.61
TMEM116-209ENST00000550020 PTPRCP08575 1304 aa11.26□□□□□ -0.61
TMEM116-209ENST00000550020 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
TMEM116-209ENST00000550020 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
TMEM116-209ENST00000550020 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
TMEM116-209ENST00000550020 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
TMEM116-209ENST00000550020 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-209ENST00000550020 NLRP6P59044 892 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 NUCB1Q02818 461 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 NBR1Q14596 966 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
TMEM116-209ENST00000550020 KDRP35968 1356 aa11.24□□□□□ -0.61
TMEM116-209ENST00000550020 KCNA6P17658 529 aa11.23□□□□□ -0.61
TMEM116-209ENST00000550020 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
TMEM116-209ENST00000550020 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
TMEM116-209ENST00000550020 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
TMEM116-209ENST00000550020 ZNF142P52746 1687 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-209ENST00000550020 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
TMEM116-209ENST00000550020 USP54Q70EL1 1684 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 TSPYL6Q8N831 410 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 KCNH5Q8NCM2 988 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
TMEM116-209ENST00000550020 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
TMEM116-209ENST00000550020 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
TMEM116-209ENST00000550020 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
TMEM116-209ENST00000550020 TBC1D32Q96NH3 1257 aa11.21□□□□□ -0.61
TMEM116-209ENST00000550020 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
TMEM116-209ENST00000550020 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
TMEM116-209ENST00000550020 STK31Q9BXU1 1019 aa11.2□□□□□ -0.62
TMEM116-209ENST00000550020 PEAK1Q9H792 1746 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms