RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
TMEM116-208ENST00000549537 KNDC1Q76NI1 1749 aa9.84□□□□□ -0.83
TMEM116-208ENST00000549537 MYOM2P54296 1465 aa9.84□□□□□ -0.83
TMEM116-208ENST00000549537 SHPRHQ149N8 1683 aa9.83□□□□□ -0.84
TMEM116-208ENST00000549537 LAMC1P11047 1609 aa9.83□□□□□ -0.84
TMEM116-208ENST00000549537 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
TMEM116-208ENST00000549537 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
TMEM116-208ENST00000549537 JCADQ9P266 1359 aa9.83□□□□□ -0.84
TMEM116-208ENST00000549537 C1orf167Q5SNV9 1468 aa9.82□□□□□ -0.84
TMEM116-208ENST00000549537 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
TMEM116-208ENST00000549537 LRPPRCP42704 1394 aaKnown RBP9.81□□□□□ -0.84
TMEM116-208ENST00000549537 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
TMEM116-208ENST00000549537 LRP6O75581 1613 aa9.81□□□□□ -0.84
TMEM116-208ENST00000549537 C14orf93Q9H972 538 aaKnown RBP9.8□□□□□ -0.84
TMEM116-208ENST00000549537 YTHDC2Q9H6S0 1430 aaKnown RBP9.8□□□□□ -0.84
TMEM116-208ENST00000549537 TK2O00142 265 aa9.79□□□□□ -0.84
TMEM116-208ENST00000549537 TBC1D12O60347 775 aa9.79□□□□□ -0.84
TMEM116-208ENST00000549537 TMEM132EQ6IEE7 984 aa9.79□□□□□ -0.84
TMEM116-208ENST00000549537 ADGRD1Q6QNK2 874 aa9.79□□□□□ -0.84
TMEM116-208ENST00000549537 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
TMEM116-208ENST00000549537 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
TMEM116-208ENST00000549537 PLEKHH1Q9ULM0 1364 aa9.78□□□□□ -0.84
TMEM116-208ENST00000549537 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
TMEM116-208ENST00000549537 ADGRB1O14514 1584 aa9.78□□□□□ -0.84
TMEM116-208ENST00000549537 SPATA31A6Q5VVP1 1343 aa9.78□□□□□ -0.84
TMEM116-208ENST00000549537 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
TMEM116-208ENST00000549537 WAPLQ7Z5K2 1190 aa9.77□□□□□ -0.85
TMEM116-208ENST00000549537 DDX17Q92841 729 aaKnown RBP9.77□□□□□ -0.85
TMEM116-208ENST00000549537 SIRT1Q96EB6 747 aa9.77□□□□□ -0.85
TMEM116-208ENST00000549537 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
TMEM116-208ENST00000549537 STK26Q9P289 416 aa9.77□□□□□ -0.85
TMEM116-208ENST00000549537 DHX57Q6P158 1386 aaKnown RBP9.76□□□□□ -0.85
TMEM116-208ENST00000549537 FMN2Q9NZ56 1722 aa9.76□□□□□ -0.85
TMEM116-208ENST00000549537 ORAI2Q96SN7 254 aa9.76□□□□□ -0.85
TMEM116-208ENST00000549537 DLC1Q96QB1 1528 aa9.76□□□□□ -0.85
TMEM116-208ENST00000549537 PNPLA6Q8IY17 1366 aa9.75□□□□□ -0.85
TMEM116-208ENST00000549537 EP400Q96L91 3159 aa9.75□□□□□ -0.85
TMEM116-208ENST00000549537 FOXK1P85037 733 aa9.75□□□□□ -0.85
TMEM116-208ENST00000549537 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
TMEM116-208ENST00000549537 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
TMEM116-208ENST00000549537 SOS2Q07890 1332 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-208ENST00000549537 PXDNQ92626 1479 aa9.74□□□□□ -0.85
TMEM116-208ENST00000549537 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
TMEM116-208ENST00000549537 LRRC59Q96AG4 307 aaKnown RBP9.74□□□□□ -0.85
TMEM116-208ENST00000549537 COL22A1Q8NFW1 1626 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-208ENST00000549537 ADGRB2O60241 1585 aa9.73□□□□□ -0.85
TMEM116-208ENST00000549537 PPP1R37O75864 691 aa9.73□□□□□ -0.85
TMEM116-208ENST00000549537 HS6ST3Q8IZP7 471 aa9.73□□□□□ -0.85
TMEM116-208ENST00000549537 VSIG10Q8N0Z9 540 aa9.73□□□□□ -0.85
TMEM116-208ENST00000549537 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-208ENST00000549537 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
TMEM116-208ENST00000549537 DCAF11Q8TEB1 546 aa9.72□□□□□ -0.85
TMEM116-208ENST00000549537 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-208ENST00000549537 RGPD8O14715 1765 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-208ENST00000549537 USP32Q8NFA0 1604 aa9.71□□□□□ -0.85
TMEM116-208ENST00000549537 KIF1AQ12756 1690 aa9.71□□□□□ -0.85
TMEM116-208ENST00000549537 PRAM1Q96QH2 718 aa9.71□□□□□ -0.86
TMEM116-208ENST00000549537 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
TMEM116-208ENST00000549537 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
TMEM116-208ENST00000549537 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-208ENST00000549537 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-208ENST00000549537 ESCO1Q5FWF5 840 aa9.7□□□□□ -0.86
TMEM116-208ENST00000549537 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-208ENST00000549537 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
TMEM116-208ENST00000549537 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
TMEM116-208ENST00000549537 NPHP3Q7Z494 1330 aa9.7□□□□□ -0.86
TMEM116-208ENST00000549537 CDK12Q9NYV4 1490 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-208ENST00000549537 NUTM2FA1L443 756 aa9.69□□□□□ -0.86
TMEM116-208ENST00000549537 HRO43593 1189 aa9.69□□□□□ -0.86
TMEM116-208ENST00000549537 MEX3CQ5U5Q3 659 aaKnown RBP9.69□□□□□ -0.86
TMEM116-208ENST00000549537 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
TMEM116-208ENST00000549537 AFF2P51816 1311 aa9.68□□□□□ -0.86
TMEM116-208ENST00000549537 FOXO3O43524 673 aa9.68□□□□□ -0.86
TMEM116-208ENST00000549537 ZNF772Q68DY9 489 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-208ENST00000549537 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
TMEM116-208ENST00000549537 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
TMEM116-208ENST00000549537 ANKARQ7Z5J8 1434 aa9.67□□□□□ -0.86
TMEM116-208ENST00000549537 SAFB2Q14151 953 aaKnown RBP eCLIP9.67□□□□□ -0.86
TMEM116-208ENST00000549537 MARF1Q9Y4F3 1742 aaKnown RBP9.67□□□□□ -0.86
TMEM116-208ENST00000549537 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
TMEM116-208ENST00000549537 PSEN2P49810 448 aa9.66□□□□□ -0.86
TMEM116-208ENST00000549537 XPCQ01831 940 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-208ENST00000549537 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
TMEM116-208ENST00000549537 POGKQ9P215 609 aa9.66□□□□□ -0.86
TMEM116-208ENST00000549537 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
TMEM116-208ENST00000549537 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
TMEM116-208ENST00000549537 PRR36Q9H6K5 1346 aa9.65□□□□□ -0.86
TMEM116-208ENST00000549537 DMRTA1Q5VZB9 504 aa9.65□□□□□ -0.86
TMEM116-208ENST00000549537 C8orf37Q96NL8 207 aa9.65□□□□□ -0.86
TMEM116-208ENST00000549537 GTF3C3Q9Y5Q9 886 aa9.65□□□□□ -0.86
TMEM116-208ENST00000549537 MINK1Q8N4C8 1332 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-208ENST00000549537 ADAMTS2O95450 1211 aa9.64□□□□□ -0.87
TMEM116-208ENST00000549537 DSG2Q14126 1118 aa9.64□□□□□ -0.87
TMEM116-208ENST00000549537 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
TMEM116-208ENST00000549537 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-208ENST00000549537 HIRIP3Q9BW71 556 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-208ENST00000549537 ABCA3Q99758 1704 aa9.64□□□□□ -0.87
TMEM116-208ENST00000549537 TNS3Q68CZ2 1445 aa9.64□□□□□ -0.87
TMEM116-208ENST00000549537 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
TMEM116-208ENST00000549537 WASLO00401 505 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms