RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 PUS7Q96PZ0 661 aaKnown RBP20.64■□□□□ 0.89
LINC00661-203ENST00000549131 LRRC37A3O60309 1634 aa20.64■□□□□ 0.89
LINC00661-203ENST00000549131 KIF20BQ96Q89 1820 aa20.63■□□□□ 0.89
LINC00661-203ENST00000549131 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
LINC00661-203ENST00000549131 NME9Q86XW9 330 aa20.63■□□□□ 0.89
LINC00661-203ENST00000549131 USP31Q70CQ4 1352 aa20.62■□□□□ 0.89
LINC00661-203ENST00000549131 SF3B2Q13435 895 aaKnown RBP20.62■□□□□ 0.89
LINC00661-203ENST00000549131 TMF1P82094 1093 aa20.61■□□□□ 0.89
LINC00661-203ENST00000549131 FAM182BQ5T319 152 aa20.61■□□□□ 0.89
LINC00661-203ENST00000549131 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
LINC00661-203ENST00000549131 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
LINC00661-203ENST00000549131 BARGINQ6ZT62 677 aa20.6■□□□□ 0.89
LINC00661-203ENST00000549131 ARHGEF25Q86VW2 580 aa20.6■□□□□ 0.89
LINC00661-203ENST00000549131 OVOS2A0A0J9YW53 1432 aa20.6■□□□□ 0.89
LINC00661-203ENST00000549131 OVOS2Q6IE36 1432 aa20.6■□□□□ 0.89
LINC00661-203ENST00000549131 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.88
LINC00661-203ENST00000549131 WDR17Q8IZU2 1322 aa20.57■□□□□ 0.88
LINC00661-203ENST00000549131 TOM1L2Q6ZVM7 507 aa20.57■□□□□ 0.88
LINC00661-203ENST00000549131 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
LINC00661-203ENST00000549131 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
LINC00661-203ENST00000549131 DEFB132Q7Z7B7 95 aa20.56■□□□□ 0.88
LINC00661-203ENST00000549131 FAM208AQ9UK61 1670 aaKnown RBP20.55■□□□□ 0.88
LINC00661-203ENST00000549131 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
LINC00661-203ENST00000549131 PDE3BQ13370 1112 aa20.54■□□□□ 0.88
LINC00661-203ENST00000549131 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
LINC00661-203ENST00000549131 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
LINC00661-203ENST00000549131 BAG6P46379 1132 aa20.53■□□□□ 0.88
LINC00661-203ENST00000549131 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
LINC00661-203ENST00000549131 FAM196AQ6ZSG2 479 aa20.51■□□□□ 0.87
LINC00661-203ENST00000549131 COG3Q96JB2 828 aa20.5■□□□□ 0.87
LINC00661-203ENST00000549131 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
LINC00661-203ENST00000549131 CCDC7Q96M83 1385 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 DISP2A7MBM2 1401 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 TRIM37O94972 964 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 ERBB3P21860 1342 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 RREB1Q92766 1687 aa20.48■□□□□ 0.87
LINC00661-203ENST00000549131 DDB1Q16531 1140 aa20.47■□□□□ 0.87
LINC00661-203ENST00000549131 CARD10Q9BWT7 1032 aa20.47■□□□□ 0.87
LINC00661-203ENST00000549131 NUP188Q5SRE5 1749 aa20.45■□□□□ 0.86
LINC00661-203ENST00000549131 EN1Q05925 392 aaPredicted RBP20.45■□□□□ 0.86
LINC00661-203ENST00000549131 CDCA7Q9BWT1 371 aaPredicted RBP20.45■□□□□ 0.86
LINC00661-203ENST00000549131 TNS2Q63HR2 1409 aa20.44■□□□□ 0.86
LINC00661-203ENST00000549131 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
LINC00661-203ENST00000549131 NLRP2Q9NX02 1062 aa20.44■□□□□ 0.86
LINC00661-203ENST00000549131 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
LINC00661-203ENST00000549131 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
LINC00661-203ENST00000549131 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
LINC00661-203ENST00000549131 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
LINC00661-203ENST00000549131 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
LINC00661-203ENST00000549131 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
LINC00661-203ENST00000549131 GGNBP2Q9H3C7 697 aa20.43■□□□□ 0.86
LINC00661-203ENST00000549131 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
LINC00661-203ENST00000549131 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
LINC00661-203ENST00000549131 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
LINC00661-203ENST00000549131 FYB1O15117 783 aa20.4■□□□□ 0.86
LINC00661-203ENST00000549131 APBA3O96018 575 aa20.4■□□□□ 0.86
LINC00661-203ENST00000549131 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
LINC00661-203ENST00000549131 IP6K1Q92551 441 aa20.39■□□□□ 0.85
LINC00661-203ENST00000549131 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
LINC00661-203ENST00000549131 NHSQ6T4R5 1651 aa20.38■□□□□ 0.85
LINC00661-203ENST00000549131 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
LINC00661-203ENST00000549131 FBLN1P23142 703 aa20.38■□□□□ 0.85
LINC00661-203ENST00000549131 AMPHP49418 695 aa20.38■□□□□ 0.85
LINC00661-203ENST00000549131 EZH2Q15910 746 aaKnown RBP20.38■□□□□ 0.85
LINC00661-203ENST00000549131 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
LINC00661-203ENST00000549131 HOXC9P31274 260 aa20.37■□□□□ 0.85
LINC00661-203ENST00000549131 KAT6BQ8WYB5 2073 aa20.37■□□□□ 0.85
LINC00661-203ENST00000549131 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
LINC00661-203ENST00000549131 IL2RBP14784 551 aa20.36■□□□□ 0.85
LINC00661-203ENST00000549131 RRS1Q15050 365 aaKnown RBP20.36■□□□□ 0.85
LINC00661-203ENST00000549131 MARCH10Q8NA82 808 aaPredicted RBP20.36■□□□□ 0.85
LINC00661-203ENST00000549131 CARD14Q9BXL6 1004 aa20.36■□□□□ 0.85
LINC00661-203ENST00000549131 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
LINC00661-203ENST00000549131 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
LINC00661-203ENST00000549131 LRP5O75197 1615 aa20.35■□□□□ 0.85
LINC00661-203ENST00000549131 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
LINC00661-203ENST00000549131 EXOC5O00471 708 aa20.35■□□□□ 0.85
LINC00661-203ENST00000549131 CAMKK2Q96RR4 588 aa20.35■□□□□ 0.85
LINC00661-203ENST00000549131 BCL9O00512 1426 aa20.35■□□□□ 0.85
LINC00661-203ENST00000549131 BTAF1O14981 1849 aa20.32■□□□□ 0.84
LINC00661-203ENST00000549131 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
LINC00661-203ENST00000549131 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
LINC00661-203ENST00000549131 FLT4P35916 1363 aa20.32■□□□□ 0.84
LINC00661-203ENST00000549131 MEGF6O75095 1541 aa20.29■□□□□ 0.84
LINC00661-203ENST00000549131 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
LINC00661-203ENST00000549131 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
LINC00661-203ENST00000549131 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
LINC00661-203ENST00000549131 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
LINC00661-203ENST00000549131 INSRP06213 1382 aa20.27■□□□□ 0.84
LINC00661-203ENST00000549131 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
LINC00661-203ENST00000549131 HSP90AB2PQ58FF8 381 aa20.25■□□□□ 0.83
LINC00661-203ENST00000549131 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
LINC00661-203ENST00000549131 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
LINC00661-203ENST00000549131 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
LINC00661-203ENST00000549131 PLSCR1O15162 318 aa20.23■□□□□ 0.83
LINC00661-203ENST00000549131 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
LINC00661-203ENST00000549131 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
LINC00661-203ENST00000549131 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
LINC00661-203ENST00000549131 PANK3Q9H999 370 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms