RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
APP-217ENST00000548570 PDCD7Q8N8D1 485 aaKnown RBP6.98□□□□□ -1.29
APP-217ENST00000548570 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
APP-217ENST00000548570 PPIP5K1Q6PFW1 1433 aa6.98□□□□□ -1.29
APP-217ENST00000548570 ACEP12821 1306 aa6.98□□□□□ -1.29
APP-217ENST00000548570 A0A1W2PP64 1363 aa6.97□□□□□ -1.29
APP-217ENST00000548570 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
APP-217ENST00000548570 FOXO3O43524 673 aa6.97□□□□□ -1.29
APP-217ENST00000548570 CHRM1P11229 460 aaPredicted RBP6.97□□□□□ -1.29
APP-217ENST00000548570 PANK3Q9H999 370 aa6.97□□□□□ -1.29
APP-217ENST00000548570 FMN2Q9NZ56 1722 aa6.97□□□□□ -1.29
APP-217ENST00000548570 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
APP-217ENST00000548570 PSEN1P49768 467 aa6.96□□□□□ -1.3
APP-217ENST00000548570 PIP4K2BP78356 416 aa6.96□□□□□ -1.3
APP-217ENST00000548570 XPCQ01831 940 aaPredicted RBP6.96□□□□□ -1.3
APP-217ENST00000548570 POLR3GLQ9BT43 218 aa6.96□□□□□ -1.3
APP-217ENST00000548570 PXDNQ92626 1479 aa6.96□□□□□ -1.3
APP-217ENST00000548570 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
APP-217ENST00000548570 USP6P35125 1406 aa6.95□□□□□ -1.3
APP-217ENST00000548570 FAM205CA6NFA0 338 aa6.95□□□□□ -1.3
APP-217ENST00000548570 TOM1O60784 492 aa6.95□□□□□ -1.3
APP-217ENST00000548570 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
APP-217ENST00000548570 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
APP-217ENST00000548570 TOPAZ1Q8N9V7 1692 aa6.95□□□□□ -1.3
APP-217ENST00000548570 DDX10Q13206 875 aaKnown RBP6.94□□□□□ -1.3
APP-217ENST00000548570 PDAP1Q13442 181 aaKnown RBP6.94□□□□□ -1.3
APP-217ENST00000548570 KRT28Q7Z3Y7 464 aa6.94□□□□□ -1.3
APP-217ENST00000548570 ZNF710Q8N1W2 664 aa6.94□□□□□ -1.3
APP-217ENST00000548570 HS3ST6Q96QI5 342 aa6.94□□□□□ -1.3
APP-217ENST00000548570 TTC21BQ7Z4L5 1316 aa6.94□□□□□ -1.3
APP-217ENST00000548570 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
APP-217ENST00000548570 MYOM1P52179 1685 aa6.93□□□□□ -1.3
APP-217ENST00000548570 FYB1O15117 783 aa6.93□□□□□ -1.3
APP-217ENST00000548570 HSPA1LP34931 641 aa6.93□□□□□ -1.3
APP-217ENST00000548570 VASPP50552 380 aaPredicted RBP6.93□□□□□ -1.3
APP-217ENST00000548570 NME9Q86XW9 330 aa6.93□□□□□ -1.3
APP-217ENST00000548570 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
APP-217ENST00000548570 SPATA31A3Q5VYP0 1347 aa6.93□□□□□ -1.3
APP-217ENST00000548570 NSD3Q9BZ95 1437 aa6.93□□□□□ -1.3
APP-217ENST00000548570 AHDC1Q5TGY3 1603 aaPredicted RBP6.92□□□□□ -1.3
APP-217ENST00000548570 TERF2IPQ9NYB0 399 aa6.92□□□□□ -1.3
APP-217ENST00000548570 NPHP3Q7Z494 1330 aa6.92□□□□□ -1.3
APP-217ENST00000548570 SBNO1A3KN83 1393 aa6.92□□□□□ -1.3
APP-217ENST00000548570 KTN1Q86UP2 1357 aaKnown RBP6.92□□□□□ -1.3
APP-217ENST00000548570 EDC4Q6P2E9 1401 aaKnown RBP6.92□□□□□ -1.3
APP-217ENST00000548570 ROBO1Q9Y6N7 1651 aa6.91□□□□□ -1.3
APP-217ENST00000548570 RIMBP2O15034 1052 aa6.91□□□□□ -1.3
APP-217ENST00000548570 FBLN1P23142 703 aa6.91□□□□□ -1.3
APP-217ENST00000548570 PSME1Q06323 249 aa6.91□□□□□ -1.3
APP-217ENST00000548570 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
APP-217ENST00000548570 HDGFL2Q7Z4V5 671 aaPredicted RBP6.91□□□□□ -1.3
APP-217ENST00000548570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.91□□□□□ -1.3
APP-217ENST00000548570 FBXO41Q8TF61 875 aa6.91□□□□□ -1.3
APP-217ENST00000548570 USP31Q70CQ4 1352 aa6.91□□□□□ -1.3
APP-217ENST00000548570 DOK7Q18PE1 504 aa6.9□□□□□ -1.3
APP-217ENST00000548570 GGNBP2Q9H3C7 697 aa6.9□□□□□ -1.3
APP-217ENST00000548570 BOLA1Q9Y3E2 137 aa6.9□□□□□ -1.3
APP-217ENST00000548570 USP19O94966 1318 aa6.9□□□□□ -1.3
APP-217ENST00000548570 PNPLA6Q8IY17 1366 aa6.9□□□□□ -1.31
APP-217ENST00000548570 OVOS2A0A0J9YW53 1432 aa6.9□□□□□ -1.31
APP-217ENST00000548570 TNS3Q68CZ2 1445 aa6.9□□□□□ -1.31
APP-217ENST00000548570 OVOS2Q6IE36 1432 aa6.9□□□□□ -1.31
APP-217ENST00000548570 NRKQ7Z2Y5 1582 aa6.9□□□□□ -1.31
APP-217ENST00000548570 COL16A1Q07092 1604 aaPredicted RBP6.9□□□□□ -1.31
APP-217ENST00000548570 NHSL1Q5SYE7 1610 aa6.9□□□□□ -1.31
APP-217ENST00000548570 CABLES1Q8TDN4 633 aa6.89□□□□□ -1.31
APP-217ENST00000548570 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
APP-217ENST00000548570 NPC1L1Q9UHC9 1359 aa6.89□□□□□ -1.31
APP-217ENST00000548570 MED1Q15648 1581 aaPredicted RBP6.89□□□□□ -1.31
APP-217ENST00000548570 TRPM3Q9HCF6 1732 aaPredicted RBP6.89□□□□□ -1.31
APP-217ENST00000548570 KIF1AQ12756 1690 aa6.88□□□□□ -1.31
APP-217ENST00000548570 TTC21AQ8NDW8 1320 aa6.88□□□□□ -1.31
APP-217ENST00000548570 CC2D1BQ5T0F9 858 aaKnown RBP6.88□□□□□ -1.31
APP-217ENST00000548570 ABTB2Q8N961 1025 aa6.88□□□□□ -1.31
APP-217ENST00000548570 LRRC59Q96AG4 307 aaKnown RBP6.88□□□□□ -1.31
APP-217ENST00000548570 RGPD8O14715 1765 aaPredicted RBP6.87□□□□□ -1.31
APP-217ENST00000548570 PARD3Q8TEW0 1356 aa6.87□□□□□ -1.31
APP-217ENST00000548570 ERBB3P21860 1342 aa6.87□□□□□ -1.31
APP-217ENST00000548570 ILDR1Q86SU0 546 aaPredicted RBP6.87□□□□□ -1.31
APP-217ENST00000548570 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
APP-217ENST00000548570 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
APP-217ENST00000548570 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
APP-217ENST00000548570 KNSTRNQ9Y448 316 aa6.87□□□□□ -1.31
APP-217ENST00000548570 PIK3C2AO00443 1686 aa6.87□□□□□ -1.31
APP-217ENST00000548570 LRP6O75581 1613 aa6.87□□□□□ -1.31
APP-217ENST00000548570 SLIT3O75094 1523 aa6.86□□□□□ -1.31
APP-217ENST00000548570 CGNL1Q0VF96 1302 aa6.86□□□□□ -1.31
APP-217ENST00000548570 GCP02774 474 aa6.86□□□□□ -1.31
APP-217ENST00000548570 NLRP6P59044 892 aa6.86□□□□□ -1.31
APP-217ENST00000548570 MON2Q7Z3U7 1717 aa6.86□□□□□ -1.31
APP-217ENST00000548570 NFAT5O94916 1531 aa6.86□□□□□ -1.31
APP-217ENST00000548570 AKAP12Q02952 1782 aa6.85□□□□□ -1.31
APP-217ENST00000548570 ARHGEF10O15013 1369 aa6.85□□□□□ -1.31
APP-217ENST00000548570 JCADQ9P266 1359 aa6.85□□□□□ -1.31
APP-217ENST00000548570 ALS2Q96Q42 1657 aa6.85□□□□□ -1.31
APP-217ENST00000548570 HOXB1P14653 301 aaPredicted RBP6.85□□□□□ -1.31
APP-217ENST00000548570 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
APP-217ENST00000548570 RRS1Q15050 365 aaKnown RBP6.85□□□□□ -1.31
APP-217ENST00000548570 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
APP-217ENST00000548570 LMOD2Q6P5Q4 547 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms