RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 PNNQ9H307 717 aaKnown RBP9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 ABCC4O15439 1325 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 PRR36Q9H6K5 1346 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 KIF24Q5T7B8 1368 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 VAMP4O75379 141 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 ARHGAP45Q92619 1136 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
PDZRN4-204ENST00000548316 ARHGAP23Q9P227 1491 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 U2SURPO15042 1029 aaKnown RBP9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 NUCB1Q02818 461 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 GSE1Q14687 1217 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 SLIT1O75093 1534 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 FRAT2O75474 233 aaPredicted RBP9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 DDIT3P35638 169 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 FAM69CQ0P6D2 419 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 IFT57Q9NWB7 429 aa9.09□□□□□ -0.95
PDZRN4-204ENST00000548316 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.96
PDZRN4-204ENST00000548316 PRKAR2BP31323 418 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 PTPRUQ92729 1446 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 TMEM2Q9UHN6 1383 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 DIP2AQ14689 1571 aa9.08□□□□□ -0.96
PDZRN4-204ENST00000548316 FBLN1P23142 703 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 PLEKHG1Q9ULL1 1385 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 NME9Q86XW9 330 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
PDZRN4-204ENST00000548316 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 TNRQ92752 1358 aa9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 SIRT2Q8IXJ6 389 aa9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 RBM25P49756 843 aaKnown RBP9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 FTSJ3Q8IY81 847 aaKnown RBP9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 TSPYL6Q8N831 410 aa9.06□□□□□ -0.96
PDZRN4-204ENST00000548316 CRB1P82279 1406 aa9.05□□□□□ -0.96
PDZRN4-204ENST00000548316 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
PDZRN4-204ENST00000548316 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
PDZRN4-204ENST00000548316 USP6P35125 1406 aa9.05□□□□□ -0.96
PDZRN4-204ENST00000548316 CYB5RLQ6IPT4 315 aa9.05□□□□□ -0.96
PDZRN4-204ENST00000548316 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 BECN1Q14457 450 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 ITPRIPQ8IWB1 547 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 GNAI1P63096 354 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 IL27Q8NEV9 243 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 KIF2CQ99661 725 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
PDZRN4-204ENST00000548316 SNX21Q969T3 373 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 CFAP44Q96MT7 982 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 KIAA0232Q92628 1395 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 THUMPD2Q9BTF0 503 aaKnown RBP9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 CCDC61Q9Y6R9 512 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 FER1L4A9Z1Z3 1794 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 BMP2KLQ5H9B9 411 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 CHD1LQ86WJ1 897 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 C8orf58Q8NAV2 365 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 C22orf23Q9BZE7 217 aa9.03□□□□□ -0.96
PDZRN4-204ENST00000548316 TTC21BQ7Z4L5 1316 aa9.02□□□□□ -0.97
PDZRN4-204ENST00000548316 HMOX1P09601 288 aa9.02□□□□□ -0.97
PDZRN4-204ENST00000548316 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
PDZRN4-204ENST00000548316 ARHGEF10O15013 1369 aa9.02□□□□□ -0.97
PDZRN4-204ENST00000548316 MED1Q15648 1581 aaPredicted RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 CEP170BQ9Y4F5 1589 aaPredicted RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 KDRP35968 1356 aa9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 GCC1Q96CN9 775 aa9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 EIF4A2Q14240 407 aaKnown RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 SENP3Q9H4L4 574 aaPredicted RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
PDZRN4-204ENST00000548316 KDM3BQ7LBC6 1761 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 CHL1O00533 1208 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 LMOD3Q0VAK6 560 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 FSD2A1L4K1 749 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 COG3Q96JB2 828 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
PDZRN4-204ENST00000548316 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 RTL1A6NKG5 1358 aa8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 LTN1O94822 1766 aa8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 TWISTNBQ3B726 338 aaPredicted RBP8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 UPF2Q9HAU5 1272 aaKnown RBP8.99□□□□□ -0.97
PDZRN4-204ENST00000548316 FAM83GA6ND36 823 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 LTKP29376 864 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 AEBP1Q8IUX7 1158 aa8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 API5Q9BZZ5 524 aaKnown RBP8.98□□□□□ -0.97
PDZRN4-204ENST00000548316 CHMP4BQ9H444 224 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms