RNA–Protein interactions for RNA: ENST00000547591.5

RAB3IP-210, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-210ENST00000547591 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
RAB3IP-210ENST00000547591 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
RAB3IP-210ENST00000547591 GPR37L1O60883 481 aa9.52□□□□□ -0.89
RAB3IP-210ENST00000547591 NR3C2P08235 984 aa9.52□□□□□ -0.89
RAB3IP-210ENST00000547591 TIMP2P16035 220 aa9.52□□□□□ -0.89
RAB3IP-210ENST00000547591 FLIIQ13045 1269 aa9.52□□□□□ -0.89
RAB3IP-210ENST00000547591 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
RAB3IP-210ENST00000547591 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
RAB3IP-210ENST00000547591 TRIM52Q96A61 297 aa9.51□□□□□ -0.89
RAB3IP-210ENST00000547591 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
RAB3IP-210ENST00000547591 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
RAB3IP-210ENST00000547591 TBC1D2BQ9UPU7 963 aa9.51□□□□□ -0.89
RAB3IP-210ENST00000547591 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-210ENST00000547591 KLF16Q9BXK1 252 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-210ENST00000547591 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
RAB3IP-210ENST00000547591 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-210ENST00000547591 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
RAB3IP-210ENST00000547591 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
RAB3IP-210ENST00000547591 KIFC2Q96AC6 838 aa9.49□□□□□ -0.89
RAB3IP-210ENST00000547591 ITPKCQ96DU7 683 aa9.48□□□□□ -0.89
RAB3IP-210ENST00000547591 DACH1Q9UI36 760 aa9.48□□□□□ -0.89
RAB3IP-210ENST00000547591 ESPNB1AK53 854 aa9.47□□□□□ -0.89
RAB3IP-210ENST00000547591 PPP1R26Q5T8A7 1209 aaPredicted RBP9.47□□□□□ -0.89
RAB3IP-210ENST00000547591 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
RAB3IP-210ENST00000547591 SCARF1Q14162 830 aa9.46□□□□□ -0.9
RAB3IP-210ENST00000547591 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
RAB3IP-210ENST00000547591 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
RAB3IP-210ENST00000547591 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
RAB3IP-210ENST00000547591 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
RAB3IP-210ENST00000547591 UPP2O95045 317 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 BMP1P13497 986 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 ABL2P42684 1182 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 RNF20Q5VTR2 975 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 MRPL14Q6P1L8 145 aaKnown RBP9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
RAB3IP-210ENST00000547591 C11orf95C9JLR9 678 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-210ENST00000547591 RAD21O60216 631 aa9.44□□□□□ -0.9
RAB3IP-210ENST00000547591 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
RAB3IP-210ENST00000547591 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
RAB3IP-210ENST00000547591 IRF5Q13568 498 aa9.43□□□□□ -0.9
RAB3IP-210ENST00000547591 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
RAB3IP-210ENST00000547591 RAB15P59190 212 aa9.42□□□□□ -0.9
RAB3IP-210ENST00000547591 POTECB2RU33 542 aa9.41□□□□□ -0.9
RAB3IP-210ENST00000547591 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
RAB3IP-210ENST00000547591 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
RAB3IP-210ENST00000547591 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
RAB3IP-210ENST00000547591 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.9
RAB3IP-210ENST00000547591 SOX11P35716 441 aa9.4□□□□□ -0.9
RAB3IP-210ENST00000547591 Q6ZVU0 165 aa9.4□□□□□ -0.9
RAB3IP-210ENST00000547591 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-210ENST00000547591 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
RAB3IP-210ENST00000547591 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-210ENST00000547591 BMP2P12643 396 aa9.38□□□□□ -0.91
RAB3IP-210ENST00000547591 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
RAB3IP-210ENST00000547591 TMPRSS4Q9NRS4 437 aa9.37□□□□□ -0.91
RAB3IP-210ENST00000547591 SNRPBP14678 240 aaKnown RBP9.36□□□□□ -0.91
RAB3IP-210ENST00000547591 CBLBQ13191 982 aa9.36□□□□□ -0.91
RAB3IP-210ENST00000547591 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
RAB3IP-210ENST00000547591 CEP126Q9P2H0 1117 aa9.36□□□□□ -0.91
RAB3IP-210ENST00000547591 ADH1AP07327 375 aa9.35□□□□□ -0.91
RAB3IP-210ENST00000547591 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
RAB3IP-210ENST00000547591 LILRA1O75019 489 aa9.34□□□□□ -0.91
RAB3IP-210ENST00000547591 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
RAB3IP-210ENST00000547591 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
RAB3IP-210ENST00000547591 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
RAB3IP-210ENST00000547591 ERVK-9P63128 1117 aa9.33□□□□□ -0.92
RAB3IP-210ENST00000547591 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
RAB3IP-210ENST00000547591 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
RAB3IP-210ENST00000547591 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-210ENST00000547591 SPINT1O43278 529 aa9.32□□□□□ -0.92
RAB3IP-210ENST00000547591 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
RAB3IP-210ENST00000547591 RELBQ01201 579 aa9.31□□□□□ -0.92
RAB3IP-210ENST00000547591 CYP2U1Q7Z449 544 aa9.31□□□□□ -0.92
RAB3IP-210ENST00000547591 MAN1A2O60476 641 aa9.3□□□□□ -0.92
RAB3IP-210ENST00000547591 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-210ENST00000547591 AGBL1Q96MI9 1066 aa9.3□□□□□ -0.92
RAB3IP-210ENST00000547591 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-210ENST00000547591 TTLL8A6PVC2 850 aa9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 PTGIRP43119 386 aa9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
RAB3IP-210ENST00000547591 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-210ENST00000547591 PHTF2Q8N3S3 785 aa9.28□□□□□ -0.92
RAB3IP-210ENST00000547591 CCDC85AQ96PX6 553 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-210ENST00000547591 MAP7D1Q3KQU3 841 aa9.27□□□□□ -0.93
RAB3IP-210ENST00000547591 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
RAB3IP-210ENST00000547591 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-210ENST00000547591 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.93
RAB3IP-210ENST00000547591 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
RAB3IP-210ENST00000547591 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
RAB3IP-210ENST00000547591 ALG2Q9H553 416 aa9.26□□□□□ -0.93
RAB3IP-210ENST00000547591 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
RAB3IP-210ENST00000547591 A6NJR5 290 aa9.25□□□□□ -0.93
RAB3IP-210ENST00000547591 TRAK2O60296 914 aa9.25□□□□□ -0.93
RAB3IP-210ENST00000547591 SCTRP47872 440 aa9.25□□□□□ -0.93
RAB3IP-210ENST00000547591 USP4Q13107 963 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms