RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
CCDC38-202ENST00000546386 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
CCDC38-202ENST00000546386 DIP2AQ14689 1571 aa15.48■□□□□ 0.07
CCDC38-202ENST00000546386 SMC4Q9NTJ3 1288 aa15.48■□□□□ 0.07
CCDC38-202ENST00000546386 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
CCDC38-202ENST00000546386 KIF20BQ96Q89 1820 aa15.48■□□□□ 0.07
CCDC38-202ENST00000546386 RGS3P49796 1198 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 ERICH6BQ5W0A0 696 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
CCDC38-202ENST00000546386 KDM4FA0A1W2PPD8 638 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 WDR63Q8IWG1 891 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 IQSEC2Q5JU85 1478 aa15.47■□□□□ 0.07
CCDC38-202ENST00000546386 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.07
CCDC38-202ENST00000546386 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
CCDC38-202ENST00000546386 EYA1Q99502 592 aa15.46■□□□□ 0.07
CCDC38-202ENST00000546386 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
CCDC38-202ENST00000546386 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.07
CCDC38-202ENST00000546386 LRRC7Q96NW7 1537 aa15.46■□□□□ 0.07
CCDC38-202ENST00000546386 NPM2Q86SE8 214 aaKnown RBP15.45■□□□□ 0.06
CCDC38-202ENST00000546386 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
CCDC38-202ENST00000546386 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
CCDC38-202ENST00000546386 IGHDP01880 384 aa15.44■□□□□ 0.06
CCDC38-202ENST00000546386 NOB1Q9ULX3 412 aaKnown RBP15.44■□□□□ 0.06
CCDC38-202ENST00000546386 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.43■□□□□ 0.06
CCDC38-202ENST00000546386 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
CCDC38-202ENST00000546386 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
CCDC38-202ENST00000546386 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
CCDC38-202ENST00000546386 KNDC1Q76NI1 1749 aa15.43■□□□□ 0.06
CCDC38-202ENST00000546386 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
CCDC38-202ENST00000546386 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
CCDC38-202ENST00000546386 CCDC27Q2M243 656 aa15.41■□□□□ 0.06
CCDC38-202ENST00000546386 HOXC9P31274 260 aa15.41■□□□□ 0.06
CCDC38-202ENST00000546386 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
CCDC38-202ENST00000546386 OVOS2A0A0J9YW53 1432 aa15.41■□□□□ 0.06
CCDC38-202ENST00000546386 OVOS2Q6IE36 1432 aa15.41■□□□□ 0.06
CCDC38-202ENST00000546386 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
CCDC38-202ENST00000546386 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
CCDC38-202ENST00000546386 TRIM27P14373 513 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 MON2Q7Z3U7 1717 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 ATF3P18847 181 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 CHRNA2Q15822 529 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 C1orf115Q9H7X2 142 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 SSH2Q76I76 1423 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 AATKQ6ZMQ8 1374 aa15.39■□□□□ 0.05
CCDC38-202ENST00000546386 ZNF335Q9H4Z2 1342 aaPredicted RBP15.38■□□□□ 0.05
CCDC38-202ENST00000546386 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
CCDC38-202ENST00000546386 ANKRD26Q9UPS8 1709 aa15.38■□□□□ 0.05
CCDC38-202ENST00000546386 NBPF6Q5VWK0 638 aa15.38■□□□□ 0.05
CCDC38-202ENST00000546386 NBPF4Q96M43 638 aa15.38■□□□□ 0.05
CCDC38-202ENST00000546386 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
CCDC38-202ENST00000546386 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
CCDC38-202ENST00000546386 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
CCDC38-202ENST00000546386 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
CCDC38-202ENST00000546386 GCP02774 474 aa15.36■□□□□ 0.05
CCDC38-202ENST00000546386 XRN1Q8IZH2 1706 aaKnown RBP15.36■□□□□ 0.05
CCDC38-202ENST00000546386 TTC21AQ8NDW8 1320 aa15.36■□□□□ 0.05
CCDC38-202ENST00000546386 C19orf44Q9H6X5 657 aa15.36■□□□□ 0.05
CCDC38-202ENST00000546386 CDK12Q9NYV4 1490 aaPredicted RBP15.35■□□□□ 0.05
CCDC38-202ENST00000546386 TWISTNBQ3B726 338 aaPredicted RBP15.35■□□□□ 0.05
CCDC38-202ENST00000546386 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
CCDC38-202ENST00000546386 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
CCDC38-202ENST00000546386 ADGRB2O60241 1585 aa15.34■□□□□ 0.05
CCDC38-202ENST00000546386 VAMP4O75379 141 aa15.34■□□□□ 0.05
CCDC38-202ENST00000546386 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
CCDC38-202ENST00000546386 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
CCDC38-202ENST00000546386 FLT4P35916 1363 aa15.34■□□□□ 0.05
CCDC38-202ENST00000546386 NGEFQ8N5V2 710 aa15.33■□□□□ 0.05
CCDC38-202ENST00000546386 PIK3C2AO00443 1686 aa15.33■□□□□ 0.05
CCDC38-202ENST00000546386 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
CCDC38-202ENST00000546386 ADGRL3Q9HAR2 1447 aa15.33■□□□□ 0.04
CCDC38-202ENST00000546386 USP31Q70CQ4 1352 aa15.33■□□□□ 0.04
CCDC38-202ENST00000546386 PIK3R4Q99570 1358 aa15.33■□□□□ 0.04
CCDC38-202ENST00000546386 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
CCDC38-202ENST00000546386 RTF1Q92541 710 aaKnown RBP15.32■□□□□ 0.04
CCDC38-202ENST00000546386 MSH5O43196 834 aa15.32■□□□□ 0.04
CCDC38-202ENST00000546386 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 MPRIPQ6WCQ1 1025 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 GNAI1P63096 354 aa15.31■□□□□ 0.04
CCDC38-202ENST00000546386 NRKQ7Z2Y5 1582 aa15.3■□□□□ 0.04
CCDC38-202ENST00000546386 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
CCDC38-202ENST00000546386 KDM2BQ8NHM5 1336 aa15.3■□□□□ 0.04
CCDC38-202ENST00000546386 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
CCDC38-202ENST00000546386 PDE4AP27815 886 aa15.29■□□□□ 0.04
CCDC38-202ENST00000546386 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
CCDC38-202ENST00000546386 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
CCDC38-202ENST00000546386 F6X3S4 739 aa15.28■□□□□ 0.04
CCDC38-202ENST00000546386 IFT57Q9NWB7 429 aa15.28■□□□□ 0.04
CCDC38-202ENST00000546386 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
CCDC38-202ENST00000546386 KCNQ3O43525 872 aa15.28■□□□□ 0.04
CCDC38-202ENST00000546386 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
CCDC38-202ENST00000546386 FMN2Q9NZ56 1722 aa15.27■□□□□ 0.04
CCDC38-202ENST00000546386 ZNF853P0CG23 659 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms