RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 CYP4X1Q8N118 509 aa6.32□□□□□ -1.4
MDM1-215ENST00000545964 SLC6A16Q9GZN6 736 aa6.32□□□□□ -1.4
MDM1-215ENST00000545964 MBD5Q9P267 1494 aa6.32□□□□□ -1.4
MDM1-215ENST00000545964 LTBP4Q8N2S1 1624 aa6.32□□□□□ -1.4
MDM1-215ENST00000545964 TNRQ92752 1358 aa6.31□□□□□ -1.4
MDM1-215ENST00000545964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
MDM1-215ENST00000545964 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
MDM1-215ENST00000545964 KIFC2Q96AC6 838 aa6.31□□□□□ -1.4
MDM1-215ENST00000545964 GMPR2Q9P2T1 348 aaKnown RBP6.31□□□□□ -1.4
MDM1-215ENST00000545964 RTEL1-TNFRSF6BF6WH68 1400 aa6.31□□□□□ -1.4
MDM1-215ENST00000545964 CEP162Q5TB80 1403 aa6.31□□□□□ -1.4
MDM1-215ENST00000545964 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
MDM1-215ENST00000545964 ACTN4O43707 911 aaKnown RBP6.3□□□□□ -1.4
MDM1-215ENST00000545964 TTC13Q8NBP0 860 aa6.3□□□□□ -1.4
MDM1-215ENST00000545964 RRP7BPQ9NSQ0 103 aa6.3□□□□□ -1.4
MDM1-215ENST00000545964 FOXC1Q12948 553 aa6.29□□□□□ -1.4
MDM1-215ENST00000545964 MIA2Q96PC5 1412 aa6.29□□□□□ -1.4
MDM1-215ENST00000545964 A2ML1A8K2U0 1454 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 NCOA2Q15596 1464 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 DNAJB2P25686 324 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 TOR4AQ9NXH8 423 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 PLA2R1Q13018 1463 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 TCOF1Q13428 1488 aaKnown RBP6.28□□□□□ -1.4
MDM1-215ENST00000545964 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
MDM1-215ENST00000545964 TIAM1Q13009 1591 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 INO80Q9ULG1 1556 aaPredicted RBP6.27□□□□□ -1.41
MDM1-215ENST00000545964 CEP170BQ9Y4F5 1589 aaPredicted RBP6.27□□□□□ -1.41
MDM1-215ENST00000545964 GRXCR2A6NFK2 248 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 C3orf80F5H4A9 247 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 PPEF1O14829 653 aaPredicted RBP6.27□□□□□ -1.41
MDM1-215ENST00000545964 BCANQ96GW7 911 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 PKD2L1Q9P0L9 805 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
MDM1-215ENST00000545964 EID1Q9Y6B2 187 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 CAMSAP2Q08AD1 1489 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 CCDC141Q6ZP82 1450 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 SHANK2Q9UPX8 1470 aa6.27□□□□□ -1.41
MDM1-215ENST00000545964 MROH2AA6NES4 1674 aa6.26□□□□□ -1.41
MDM1-215ENST00000545964 EHBP1L1Q8N3D4 1523 aa6.26□□□□□ -1.41
MDM1-215ENST00000545964 LTKP29376 864 aa6.26□□□□□ -1.41
MDM1-215ENST00000545964 NPAS3Q8IXF0 933 aa6.26□□□□□ -1.41
MDM1-215ENST00000545964 PLXNC1O60486 1568 aa6.26□□□□□ -1.41
MDM1-215ENST00000545964 NPHP4O75161 1426 aaPredicted RBP6.25□□□□□ -1.41
MDM1-215ENST00000545964 FAM135AQ9P2D6 1515 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 DNMT1P26358 1616 aaKnown RBP6.25□□□□□ -1.41
MDM1-215ENST00000545964 TLL1O43897 1013 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 ZSCAN1Q8NBB4 408 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 EYA1Q99502 592 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 PZPP20742 1482 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 ADGBQ8N7X0 1667 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 MYO3AQ8NEV4 1616 aa6.25□□□□□ -1.41
MDM1-215ENST00000545964 SPATA31D1Q6ZQQ2 1576 aa6.24□□□□□ -1.41
MDM1-215ENST00000545964 LRRC9Q6ZRR7 1453 aa6.24□□□□□ -1.41
MDM1-215ENST00000545964 TTC24A2A3L6 582 aaPredicted RBP6.24□□□□□ -1.41
MDM1-215ENST00000545964 PADI6Q6TGC4 694 aa6.24□□□□□ -1.41
MDM1-215ENST00000545964 RBM46Q8TBY0 533 aaKnown RBP6.24□□□□□ -1.41
MDM1-215ENST00000545964 TRIM47Q96LD4 638 aa6.24□□□□□ -1.41
MDM1-215ENST00000545964 UGGT1Q9NYU2 1555 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 NLRP1Q9C000 1473 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 ZBTB24O43167 697 aaPredicted RBP6.23□□□□□ -1.41
MDM1-215ENST00000545964 IDI1Q13907 227 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 FAM50AQ14320 339 aaKnown RBP6.23□□□□□ -1.41
MDM1-215ENST00000545964 PROSER2Q86WR7 435 aaPredicted RBP6.23□□□□□ -1.41
MDM1-215ENST00000545964 SLC26A8Q96RN1 970 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 DACH1Q9UI36 760 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 KDM5DQ9BY66 1539 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 MYOM3Q5VTT5 1437 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 VPS8Q8N3P4 1428 aa6.23□□□□□ -1.41
MDM1-215ENST00000545964 OSBPP22059 807 aa6.22□□□□□ -1.41
MDM1-215ENST00000545964 IRF7Q92985 503 aa6.22□□□□□ -1.41
MDM1-215ENST00000545964 ATP13A2Q9NQ11 1180 aa6.22□□□□□ -1.41
MDM1-215ENST00000545964 TSHZ2Q9NRE2 1034 aa6.22□□□□□ -1.41
MDM1-215ENST00000545964 KANK1Q14678 1352 aa6.21□□□□□ -1.41
MDM1-215ENST00000545964 KIF15Q9NS87 1388 aa6.21□□□□□ -1.41
MDM1-215ENST00000545964 CPS1P31327 1500 aa6.21□□□□□ -1.42
MDM1-215ENST00000545964 ZNF142P52746 1687 aaPredicted RBP6.21□□□□□ -1.42
MDM1-215ENST00000545964 CFHP08603 1231 aa6.21□□□□□ -1.42
MDM1-215ENST00000545964 SUZ12Q15022 739 aaKnown RBP6.21□□□□□ -1.42
MDM1-215ENST00000545964 E2F4Q16254 413 aa6.21□□□□□ -1.42
MDM1-215ENST00000545964 SPSB2Q99619 263 aa6.21□□□□□ -1.42
MDM1-215ENST00000545964 TMEM134Q9H6X4 195 aa6.21□□□□□ -1.42
MDM1-215ENST00000545964 ARHGEF5Q12774 1597 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 ABCC5O15440 1437 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 KCNA6P17658 529 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 SNIP1Q8TAD8 396 aaKnown RBP6.2□□□□□ -1.42
MDM1-215ENST00000545964 CDHR5Q9HBB8 845 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 MED14O60244 1454 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 ERVK-7P63135 1459 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 ABCC3O15438 1527 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 LRRC7Q96NW7 1537 aa6.2□□□□□ -1.42
MDM1-215ENST00000545964 CFAP65Q6ZU64 1925 aaKnown RBP6.19□□□□□ -1.42
MDM1-215ENST00000545964 NEURL4Q96JN8 1562 aa6.19□□□□□ -1.42
MDM1-215ENST00000545964 PPP1R15AO75807 674 aaPredicted RBP6.19□□□□□ -1.42
MDM1-215ENST00000545964 ITGAEP38570 1179 aa6.19□□□□□ -1.42
MDM1-215ENST00000545964 PLA2G2CQ5R387 149 aa6.19□□□□□ -1.42
MDM1-215ENST00000545964 SCUBE3Q8IX30 993 aa6.19□□□□□ -1.42
MDM1-215ENST00000545964 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
MDM1-215ENST00000545964 NXF1Q9UBU9 619 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms