RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 MCCP23508 829 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 KIAA1210Q9ULL0 1709 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 TULP4Q9NRJ4 1543 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
NECAP1-208ENST00000545807 PTMSP20962 102 aa8.37□□□□□ -1.07
NECAP1-208ENST00000545807 TRIM44Q96DX7 344 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-208ENST00000545807 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
NECAP1-208ENST00000545807 FYB1O15117 783 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 PHF14O94880 888 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 U2AF1L5P0DN76 240 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-208ENST00000545807 U2AF1Q01081 240 aaKnown RBP eCLIP8.36□□□□□ -1.07
NECAP1-208ENST00000545807 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
NECAP1-208ENST00000545807 ANKLE2Q86XL3 938 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 MYH16Q9H6N6 1097 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 SETBP1Q9Y6X0 1596 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 FER1L4A9Z1Z3 1794 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 NEURL4Q96JN8 1562 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 E9PSI1 815 aa8.36□□□□□ -1.07
NECAP1-208ENST00000545807 RIMS1Q86UR5 1692 aaKnown RBP8.35□□□□□ -1.07
NECAP1-208ENST00000545807 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
NECAP1-208ENST00000545807 ARHGEF28Q8N1W1 1705 aaKnown RBP8.35□□□□□ -1.07
NECAP1-208ENST00000545807 C3P01024 1663 aa8.35□□□□□ -1.07
NECAP1-208ENST00000545807 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-208ENST00000545807 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
NECAP1-208ENST00000545807 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
NECAP1-208ENST00000545807 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
NECAP1-208ENST00000545807 LMOD2Q6P5Q4 547 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 CARD10Q9BWT7 1032 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 CCDC61Q9Y6R9 512 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 ABCC11Q96J66 1382 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 MYOM1P52179 1685 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 ADAMTS13Q76LX8 1427 aa8.34□□□□□ -1.07
NECAP1-208ENST00000545807 PLIN1O60240 522 aa8.34□□□□□ -1.08
NECAP1-208ENST00000545807 APPP05067 770 aa8.34□□□□□ -1.08
NECAP1-208ENST00000545807 FAM43BQ6ZT52 329 aaPredicted RBP8.34□□□□□ -1.08
NECAP1-208ENST00000545807 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
NECAP1-208ENST00000545807 CGNQ9P2M7 1197 aaKnown RBP8.33□□□□□ -1.08
NECAP1-208ENST00000545807 NUDCQ9Y266 331 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 CFAP53Q96M91 514 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 PPIP5K1Q6PFW1 1433 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 PTPRUQ92729 1446 aa8.33□□□□□ -1.08
NECAP1-208ENST00000545807 UQCRHLA0A096LP55 91 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 CLSTN1O94985 981 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 UQCRHP07919 91 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 HMOX1P09601 288 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 CEP120Q8N960 986 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 UBR1Q8IWV7 1749 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 ACEP12821 1306 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 ZSCAN30Q86W11 494 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 NLRP1Q9C000 1473 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 PLEKHG1Q9ULL1 1385 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 GRPEL1Q9HAV7 217 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 DMRT2Q9Y5R5 561 aa8.32□□□□□ -1.08
NECAP1-208ENST00000545807 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
NECAP1-208ENST00000545807 TULP2O00295 520 aa8.31□□□□□ -1.08
NECAP1-208ENST00000545807 EGFL6Q8IUX8 553 aa8.3□□□□□ -1.08
NECAP1-208ENST00000545807 SPINK5Q9NQ38 1064 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-208ENST00000545807 COG3Q96JB2 828 aa8.3□□□□□ -1.08
NECAP1-208ENST00000545807 NRXN3Q9Y4C0 1643 aa8.3□□□□□ -1.08
NECAP1-208ENST00000545807 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-208ENST00000545807 TCP11L2Q8N4U5 519 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 LTV1Q96GA3 475 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-208ENST00000545807 PPP1R9BQ96SB3 815 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 ZNF500O60304 480 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-208ENST00000545807 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 RCAN3Q9UKA8 241 aa8.29□□□□□ -1.08
NECAP1-208ENST00000545807 R3HCC1Q9Y3T6 440 aaKnown RBP8.29□□□□□ -1.08
NECAP1-208ENST00000545807 AEBP1Q8IUX7 1158 aa8.28□□□□□ -1.08
NECAP1-208ENST00000545807 FOXO3O43524 673 aa8.28□□□□□ -1.08
NECAP1-208ENST00000545807 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
NECAP1-208ENST00000545807 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
NECAP1-208ENST00000545807 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.08
NECAP1-208ENST00000545807 NLRP6P59044 892 aa8.27□□□□□ -1.08
NECAP1-208ENST00000545807 GOLGA2Q08379 1002 aa8.27□□□□□ -1.08
NECAP1-208ENST00000545807 TPRNQ4KMQ1 711 aa8.27□□□□□ -1.08
NECAP1-208ENST00000545807 DDX17Q92841 729 aaKnown RBP8.27□□□□□ -1.08
NECAP1-208ENST00000545807 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.08
NECAP1-208ENST00000545807 TSPYL1Q9H0U9 437 aa8.27□□□□□ -1.08
NECAP1-208ENST00000545807 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
NECAP1-208ENST00000545807 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
NECAP1-208ENST00000545807 EFCC1Q9HA90 598 aa8.27□□□□□ -1.09
NECAP1-208ENST00000545807 VIRMAQ69YN4 1812 aaKnown RBP8.27□□□□□ -1.09
NECAP1-208ENST00000545807 NPC1L1Q9UHC9 1359 aa8.27□□□□□ -1.09
NECAP1-208ENST00000545807 KCNJ4P48050 445 aa8.27□□□□□ -1.09
NECAP1-208ENST00000545807 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
NECAP1-208ENST00000545807 CEP170BQ9Y4F5 1589 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-208ENST00000545807 SETD1BQ9UPS6 1966 aaKnown RBP8.26□□□□□ -1.09
NECAP1-208ENST00000545807 HS1BP3Q53T59 392 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms