RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ESCO1Q5FWF5 840 aa14.95□□□□□ -0.02
COL4A6-209ENST00000545689 ZNF771Q7L3S4 317 aaPredicted RBP14.95□□□□□ -0.02
COL4A6-209ENST00000545689 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL4A6-209ENST00000545689 TCEAL9Q9UHQ7 104 aa14.95□□□□□ -0.02
COL4A6-209ENST00000545689 CCDC158Q5M9N0 1113 aa14.95□□□□□ -0.02
COL4A6-209ENST00000545689 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
COL4A6-209ENST00000545689 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
COL4A6-209ENST00000545689 PLB1Q6P1J6 1458 aa14.94□□□□□ -0.02
COL4A6-209ENST00000545689 PIP4K2AP48426 406 aaPredicted RBP14.94□□□□□ -0.02
COL4A6-209ENST00000545689 JMYQ8N9B5 988 aa14.94□□□□□ -0.02
COL4A6-209ENST00000545689 DNAJC2Q99543 621 aaKnown RBP14.94□□□□□ -0.02
COL4A6-209ENST00000545689 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
COL4A6-209ENST00000545689 CTDP1Q9Y5B0 961 aaPredicted RBP14.93□□□□□ -0.02
COL4A6-209ENST00000545689 CCDC192P0DO97 292 aa14.93□□□□□ -0.02
COL4A6-209ENST00000545689 TRIM5Q9C035 493 aa14.93□□□□□ -0.02
COL4A6-209ENST00000545689 LRPPRCP42704 1394 aaKnown RBP14.93□□□□□ -0.02
COL4A6-209ENST00000545689 ZSCAN25Q6NSZ9 544 aa14.92□□□□□ -0.02
COL4A6-209ENST00000545689 ADGRL1O94910 1474 aa14.92□□□□□ -0.02
COL4A6-209ENST00000545689 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
COL4A6-209ENST00000545689 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
COL4A6-209ENST00000545689 KRT32Q14532 448 aa14.92□□□□□ -0.02
COL4A6-209ENST00000545689 DHX29Q7Z478 1369 aaKnown RBP14.92□□□□□ -0.02
COL4A6-209ENST00000545689 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 FOSBP53539 338 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 AK7Q96M32 723 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 R3HCC1Q9Y3T6 440 aaKnown RBP14.91□□□□□ -0.02
COL4A6-209ENST00000545689 CDR1P51861 262 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 RARSP54136 660 aaKnown RBP14.91□□□□□ -0.02
COL4A6-209ENST00000545689 KRT85P78386 507 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 GRPEL1Q9HAV7 217 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 RAB11FIP3O75154 756 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 MCM4P33991 863 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 RNF214Q8ND24 703 aa14.91□□□□□ -0.02
COL4A6-209ENST00000545689 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 ERCC4Q92889 916 aaPredicted RBP14.9□□□□□ -0.02
COL4A6-209ENST00000545689 GNL3LQ9NVN8 582 aaKnown RBP14.9□□□□□ -0.02
COL4A6-209ENST00000545689 NUP160Q12769 1436 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 STK38Q15208 465 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 FILIP1LQ4L180 1135 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
COL4A6-209ENST00000545689 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 DACH1Q9UI36 760 aa14.9□□□□□ -0.02
COL4A6-209ENST00000545689 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
COL4A6-209ENST00000545689 C11orf95C9JLR9 678 aaPredicted RBP14.89□□□□□ -0.03
COL4A6-209ENST00000545689 TXLNAP40222 546 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 GNAT3A8MTJ3 354 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 FIBPO43427 364 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 IL27Q8NEV9 243 aa14.89□□□□□ -0.03
COL4A6-209ENST00000545689 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
COL4A6-209ENST00000545689 CABP4P57796 275 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 RUFY1Q96T51 708 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 CTNNA3Q9UI47 895 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 NACAP1Q9BZK3 213 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
COL4A6-209ENST00000545689 FBXW7Q969H0 707 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 PDRG1Q9NUG6 133 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 HSP90B2PQ58FF3 399 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 CDKL5O76039 1030 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 BLOC1S2Q6QNY1 142 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 IL16Q14005 1332 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
COL4A6-209ENST00000545689 TNMDQ9H2S6 317 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 RAPGEF6Q8TEU7 1601 aa14.87□□□□□ -0.03
COL4A6-209ENST00000545689 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 RAD21O60216 631 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 SMC2O95347 1197 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 CCDC43Q96MW1 224 aaKnown RBP14.86□□□□□ -0.03
COL4A6-209ENST00000545689 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 ANO8Q9HCE9 1232 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-209ENST00000545689 AACSQ86V21 672 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 PDILTQ8N807 584 aa14.86□□□□□ -0.03
COL4A6-209ENST00000545689 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 MSH5O43196 834 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 RRS1Q15050 365 aaKnown RBP14.85□□□□□ -0.03
COL4A6-209ENST00000545689 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
COL4A6-209ENST00000545689 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
COL4A6-209ENST00000545689 BRPF3Q9ULD4 1205 aa14.84□□□□□ -0.03
COL4A6-209ENST00000545689 PTPRCP08575 1304 aa14.84□□□□□ -0.03
COL4A6-209ENST00000545689 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
COL4A6-209ENST00000545689 GPATCH8Q9UKJ3 1502 aaKnown RBP14.84□□□□□ -0.03
COL4A6-209ENST00000545689 MAGEC2Q9UBF1 373 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-209ENST00000545689 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
COL4A6-209ENST00000545689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.03
COL4A6-209ENST00000545689 EPS15P42566 896 aa14.83□□□□□ -0.03
COL4A6-209ENST00000545689 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms