RNA–Protein interactions for RNA: ENST00000545479.5

NPIPA1-207, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-207ENST00000545479 RGS12O14924 1447 aa9.58□□□□□ -0.88
NPIPA1-207ENST00000545479 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
NPIPA1-207ENST00000545479 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
NPIPA1-207ENST00000545479 C8orf37Q96NL8 207 aa9.58□□□□□ -0.88
NPIPA1-207ENST00000545479 PLA2G2EQ9NZK7 142 aa9.58□□□□□ -0.88
NPIPA1-207ENST00000545479 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
NPIPA1-207ENST00000545479 LAMC1P11047 1609 aa9.57□□□□□ -0.88
NPIPA1-207ENST00000545479 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
NPIPA1-207ENST00000545479 PLEKHH1Q9ULM0 1364 aa9.57□□□□□ -0.88
NPIPA1-207ENST00000545479 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
NPIPA1-207ENST00000545479 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 KIF1BO60333 1816 aa9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 PPLO60437 1756 aa9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 RXRBP28702 533 aa9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 DSG2Q14126 1118 aa9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 TECPR2O15040 1411 aa9.56□□□□□ -0.88
NPIPA1-207ENST00000545479 CDC42BPGQ6DT37 1551 aa9.55□□□□□ -0.88
NPIPA1-207ENST00000545479 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
NPIPA1-207ENST00000545479 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
NPIPA1-207ENST00000545479 CCDC144AA2RUR9 1427 aa9.55□□□□□ -0.88
NPIPA1-207ENST00000545479 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
NPIPA1-207ENST00000545479 MYOM2P54296 1465 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 PXDNQ92626 1479 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 HRO43593 1189 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 PSEN2P49810 448 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 WAPLQ7Z5K2 1190 aa9.54□□□□□ -0.88
NPIPA1-207ENST00000545479 LRPPRCP42704 1394 aaKnown RBP9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 XPCQ01831 940 aaPredicted RBP9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 TMEM132EQ6IEE7 984 aa9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 MPHOSPH9Q99550 1183 aa9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 STK26Q9P289 416 aa9.53□□□□□ -0.88
NPIPA1-207ENST00000545479 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
NPIPA1-207ENST00000545479 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.89
NPIPA1-207ENST00000545479 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
NPIPA1-207ENST00000545479 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
NPIPA1-207ENST00000545479 IFT172Q9UG01 1749 aa9.51□□□□□ -0.89
NPIPA1-207ENST00000545479 COL22A1Q8NFW1 1626 aaPredicted RBP9.51□□□□□ -0.89
NPIPA1-207ENST00000545479 NRXN1Q9ULB1 1477 aa9.51□□□□□ -0.89
NPIPA1-207ENST00000545479 ATRNO75882 1429 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 FOXO3O43524 673 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 RBM6P78332 1123 aaKnown RBP9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 ESCO1Q5FWF5 840 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 NPHP3Q7Z494 1330 aa9.5□□□□□ -0.89
NPIPA1-207ENST00000545479 BCL9LQ86UU0 1499 aa9.49□□□□□ -0.89
NPIPA1-207ENST00000545479 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
NPIPA1-207ENST00000545479 USP21Q9UK80 565 aa9.49□□□□□ -0.89
NPIPA1-207ENST00000545479 KNDC1Q76NI1 1749 aa9.48□□□□□ -0.89
NPIPA1-207ENST00000545479 KCTD12Q96CX2 325 aaKnown RBP9.48□□□□□ -0.89
NPIPA1-207ENST00000545479 CFAP70Q5T0N1 1121 aa9.47□□□□□ -0.89
NPIPA1-207ENST00000545479 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
NPIPA1-207ENST00000545479 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
NPIPA1-207ENST00000545479 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
NPIPA1-207ENST00000545479 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
NPIPA1-207ENST00000545479 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
NPIPA1-207ENST00000545479 ADGRB1O14514 1584 aa9.46□□□□□ -0.9
NPIPA1-207ENST00000545479 SAFB2Q14151 953 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPIPA1-207ENST00000545479 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
NPIPA1-207ENST00000545479 SLIT2O94813 1529 aa9.45□□□□□ -0.9
NPIPA1-207ENST00000545479 PPP1R15BQ5SWA1 713 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 TNS3Q68CZ2 1445 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 GLI3P10071 1580 aa9.44□□□□□ -0.9
NPIPA1-207ENST00000545479 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
NPIPA1-207ENST00000545479 KIF1AQ12756 1690 aa9.43□□□□□ -0.9
NPIPA1-207ENST00000545479 RALGAPBQ86X10 1494 aa9.43□□□□□ -0.9
NPIPA1-207ENST00000545479 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-207ENST00000545479 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
NPIPA1-207ENST00000545479 USP32Q8NFA0 1604 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 DLC1Q96QB1 1528 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 DHX57Q6P158 1386 aaKnown RBP9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 EP400Q96L91 3159 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 PDE4AP27815 886 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
NPIPA1-207ENST00000545479 ADGRB2O60241 1585 aa9.41□□□□□ -0.9
NPIPA1-207ENST00000545479 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
NPIPA1-207ENST00000545479 SBNO1A3KN83 1393 aa9.4□□□□□ -0.9
NPIPA1-207ENST00000545479 PTPREP23469 700 aa9.4□□□□□ -0.9
NPIPA1-207ENST00000545479 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
NPIPA1-207ENST00000545479 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
NPIPA1-207ENST00000545479 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
NPIPA1-207ENST00000545479 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
NPIPA1-207ENST00000545479 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
NPIPA1-207ENST00000545479 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
NPIPA1-207ENST00000545479 FOSBP53539 338 aa9.39□□□□□ -0.91
NPIPA1-207ENST00000545479 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
NPIPA1-207ENST00000545479 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms