RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 SAFB2Q14151 953 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 CARD14Q9BXL6 1004 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 ITSN1Q15811 1721 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 MON2Q7Z3U7 1717 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 TERF2IPQ9NYB0 399 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 AKAP12Q02952 1782 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 PTPRUQ92729 1446 aa7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-214ENST00000545358 EDC4Q6P2E9 1401 aaKnown RBP7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 NRKQ7Z2Y5 1582 aa7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 BCANQ96GW7 911 aa7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 CDK19Q9BWU1 502 aa7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 SHPRHQ149N8 1683 aa7.31□□□□□ -1.24
NPIPB3-214ENST00000545358 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
NPIPB3-214ENST00000545358 CPSF1Q10570 1443 aaKnown RBP7.3□□□□□ -1.24
NPIPB3-214ENST00000545358 PPIP5K1Q6PFW1 1433 aa7.3□□□□□ -1.24
NPIPB3-214ENST00000545358 SMG6Q86US8 1419 aaKnown RBP7.3□□□□□ -1.24
NPIPB3-214ENST00000545358 WASLO00401 505 aaPredicted RBP7.3□□□□□ -1.24
NPIPB3-214ENST00000545358 CHD2O14647 1828 aaKnown RBP7.29□□□□□ -1.24
NPIPB3-214ENST00000545358 WDR43Q15061 677 aaKnown RBP eCLIP7.29□□□□□ -1.24
NPIPB3-214ENST00000545358 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
NPIPB3-214ENST00000545358 MORC1Q86VD1 984 aa7.29□□□□□ -1.24
NPIPB3-214ENST00000545358 ANKARQ7Z5J8 1434 aa7.28□□□□□ -1.24
NPIPB3-214ENST00000545358 FMN2Q9NZ56 1722 aa7.28□□□□□ -1.24
NPIPB3-214ENST00000545358 NEFLP07196 543 aa7.28□□□□□ -1.24
NPIPB3-214ENST00000545358 ANKLE2Q86XL3 938 aa7.28□□□□□ -1.24
NPIPB3-214ENST00000545358 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.24
NPIPB3-214ENST00000545358 NALCNQ8IZF0 1738 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 PDE3BQ13370 1112 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 SLC26A8Q96RN1 970 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 PLSCR2Q9NRY7 297 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 NUDCQ9Y266 331 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 AMOTL2Q9Y2J4 779 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 LRRC7Q96NW7 1537 aa7.27□□□□□ -1.25
NPIPB3-214ENST00000545358 COL3A1P02461 1466 aaPredicted RBP7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 NKTRP30414 1462 aaKnown RBP7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 IQSEC2Q5JU85 1478 aa7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 NKX1-1Q15270 411 aaPredicted RBP7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 NUDT16Q96DE0 195 aaKnown RBP7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 CFAP53Q96M91 514 aa7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 CABP1Q9NZU7 370 aa7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
NPIPB3-214ENST00000545358 USP54Q70EL1 1684 aa7.25□□□□□ -1.25
NPIPB3-214ENST00000545358 ADGRL3Q9HAR2 1447 aa7.25□□□□□ -1.25
NPIPB3-214ENST00000545358 CDK12Q9NYV4 1490 aaPredicted RBP7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 AATKQ6ZMQ8 1374 aa7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 FYB1O15117 783 aa7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 BBXQ8WY36 941 aaPredicted RBP7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 FAM163AQ96GL9 167 aaPredicted RBP7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 ADAMTS8Q9UP79 889 aa7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 SUPT16HQ9Y5B9 1047 aaKnown RBP7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 USP6P35125 1406 aa7.24□□□□□ -1.25
NPIPB3-214ENST00000545358 RIMBP2O15034 1052 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 KCNA6P17658 529 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 DOK7Q18PE1 504 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 ERICH6BQ5W0A0 696 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 OVOS2A0A0J9YW53 1432 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 OVOS2Q6IE36 1432 aa7.23□□□□□ -1.25
NPIPB3-214ENST00000545358 PNPLA6Q8IY17 1366 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 SSH2Q76I76 1423 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 MTHFSP49914 203 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 TMC2Q8TDI7 906 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 TTC21AQ8NDW8 1320 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 ZNF521Q96K83 1311 aa7.22□□□□□ -1.25
NPIPB3-214ENST00000545358 RGPD8O14715 1765 aaPredicted RBP7.21□□□□□ -1.25
NPIPB3-214ENST00000545358 GTPBP6O43824 516 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 PPP1R37O75864 691 aa7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 TNNT2P45379 298 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 TMEM92Q6UXU6 159 aa7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 PIK3C2AO00443 1686 aa7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 RNF123Q5XPI4 1314 aa7.21□□□□□ -1.26
NPIPB3-214ENST00000545358 KIF1AQ12756 1690 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 RUNDC1Q96C34 613 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 COG3Q96JB2 828 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 ZSWIM6Q9HCJ5 1215 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 ACEP12821 1306 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 TTC21BQ7Z4L5 1316 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 MAP2P11137 1827 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
NPIPB3-214ENST00000545358 DCCP43146 1447 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 NCOA3Q9Y6Q9 1424 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 KIF3CO14782 793 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 ST18O60284 1047 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 NME9Q86XW9 330 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 ZNF710Q8N1W2 664 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 NCKAP5LQ9HCH0 1330 aa7.19□□□□□ -1.26
NPIPB3-214ENST00000545358 MARF1Q9Y4F3 1742 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-214ENST00000545358 LMTK3Q96Q04 1460 aa7.18□□□□□ -1.26
NPIPB3-214ENST00000545358 CCDC146Q8IYE0 955 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 653.2 ms