RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 GNAI3P08754 354 aa23.69■■□□□ 1.38
BPTF-208ENST00000544778 TMEM87AQ8NBN3 555 aa23.69■■□□□ 1.38
BPTF-208ENST00000544778 ANAPC15P60006 121 aa23.68■■□□□ 1.38
BPTF-208ENST00000544778 TOM1L2Q6ZVM7 507 aa23.68■■□□□ 1.38
BPTF-208ENST00000544778 TATP17735 454 aaPredicted RBP23.68■■□□□ 1.38
BPTF-208ENST00000544778 PRKRIP1Q9H875 184 aaPredicted RBP23.67■■□□□ 1.38
BPTF-208ENST00000544778 BMP2KQ9NSY1 1161 aaPredicted RBP23.67■■□□□ 1.38
BPTF-208ENST00000544778 PAXIP1Q6ZW49 1069 aaPredicted RBP23.67■■□□□ 1.38
BPTF-208ENST00000544778 CCDC66A2RUB6 948 aa23.67■■□□□ 1.38
BPTF-208ENST00000544778 TAF3Q5VWG9 929 aa23.67■■□□□ 1.38
BPTF-208ENST00000544778 BICDL1Q6ZP65 573 aa23.67■■□□□ 1.38
BPTF-208ENST00000544778 NOL7Q9UMY1 257 aaKnown RBP23.67■■□□□ 1.38
BPTF-208ENST00000544778 TNMDQ9H2S6 317 aa23.67■■□□□ 1.38
BPTF-208ENST00000544778 NFKBIBQ15653 356 aa23.66■■□□□ 1.38
BPTF-208ENST00000544778 GAS2L2Q8NHY3 880 aa23.66■■□□□ 1.38
BPTF-208ENST00000544778 CCDC57Q2TAC2 916 aa23.66■■□□□ 1.38
BPTF-208ENST00000544778 TDO2P48775 406 aa23.66■■□□□ 1.38
BPTF-208ENST00000544778 GNAI2P04899 355 aa23.66■■□□□ 1.38
BPTF-208ENST00000544778 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
BPTF-208ENST00000544778 TRAK2O60296 914 aa23.63■■□□□ 1.37
BPTF-208ENST00000544778 KIAA1328Q86T90 577 aa23.63■■□□□ 1.37
BPTF-208ENST00000544778 JAKMIP3Q5VZ66 844 aa23.63■■□□□ 1.37
BPTF-208ENST00000544778 RBM10P98175 930 aaKnown RBP23.63■■□□□ 1.37
BPTF-208ENST00000544778 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
BPTF-208ENST00000544778 MRE11P49959 708 aa23.63■■□□□ 1.37
BPTF-208ENST00000544778 MPNDQ8N594 471 aa23.62■■□□□ 1.37
BPTF-208ENST00000544778 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
BPTF-208ENST00000544778 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
BPTF-208ENST00000544778 PSMD1Q99460 953 aa23.62■■□□□ 1.37
BPTF-208ENST00000544778 WDR70Q9NW82 654 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 RAI14Q9P0K7 980 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 CCDC91Q7Z6B0 441 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 CEP57L1Q8IYX8 460 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 ZSCAN25Q6NSZ9 544 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 DNAI2Q9GZS0 605 aa23.61■■□□□ 1.37
BPTF-208ENST00000544778 GOLGA6L10A0A0M3HER8 536 aa23.6■■□□□ 1.37
BPTF-208ENST00000544778 UBAC1Q9BSL1 405 aa23.6■■□□□ 1.37
BPTF-208ENST00000544778 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
BPTF-208ENST00000544778 MBD3O95983 291 aa23.6■■□□□ 1.37
BPTF-208ENST00000544778 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
BPTF-208ENST00000544778 MCM2P49736 904 aa23.59■■□□□ 1.37
BPTF-208ENST00000544778 IQCEQ6IPM2 695 aa23.59■■□□□ 1.37
BPTF-208ENST00000544778 LRRCC1Q9C099 1032 aa23.59■■□□□ 1.37
BPTF-208ENST00000544778 INCENPQ9NQS7 918 aa23.58■■□□□ 1.37
BPTF-208ENST00000544778 LRP2BPQ9P2M1 347 aa23.58■■□□□ 1.37
BPTF-208ENST00000544778 TTLL12Q14166 644 aaPredicted RBP23.58■■□□□ 1.37
BPTF-208ENST00000544778 CBFA2T2O43439 604 aa23.58■■□□□ 1.37
BPTF-208ENST00000544778 NF2P35240 595 aa23.58■■□□□ 1.36
BPTF-208ENST00000544778 CCDC113Q9H0I3 377 aa23.58■■□□□ 1.36
BPTF-208ENST00000544778 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
BPTF-208ENST00000544778 MTERF4Q7Z6M4 381 aaKnown RBP23.57■■□□□ 1.36
BPTF-208ENST00000544778 EIF3JO75822 258 aaKnown RBP23.57■■□□□ 1.36
BPTF-208ENST00000544778 TNIP1Q15025 636 aa23.57■■□□□ 1.36
BPTF-208ENST00000544778 TAF4BQ92750 862 aa23.57■■□□□ 1.36
BPTF-208ENST00000544778 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
BPTF-208ENST00000544778 PPP4R3AQ6IN85 833 aa23.57■■□□□ 1.36
BPTF-208ENST00000544778 SLC4A2P04920 1241 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 MTHFSP49914 203 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 HDGFL1Q5TGJ6 251 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 AEBP1Q8IUX7 1158 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 WDR78Q5VTH9 848 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 TMOD2Q9NZR1 351 aa23.56■■□□□ 1.36
BPTF-208ENST00000544778 ERLIN1O75477 346 aa23.55■■□□□ 1.36
BPTF-208ENST00000544778 TWISTNBQ3B726 338 aaPredicted RBP23.55■■□□□ 1.36
BPTF-208ENST00000544778 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
BPTF-208ENST00000544778 MAP2K1Q02750 393 aaPredicted RBP23.55■■□□□ 1.36
BPTF-208ENST00000544778 DYDC1Q8WWB3 177 aa23.55■■□□□ 1.36
BPTF-208ENST00000544778 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
BPTF-208ENST00000544778 ZNF397Q8NF99 534 aaPredicted RBP23.54■■□□□ 1.36
BPTF-208ENST00000544778 CDKL5O76039 1030 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 LARP1BQ659C4 914 aaKnown RBP23.54■■□□□ 1.36
BPTF-208ENST00000544778 PTPRGP23470 1445 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 CNTLNQ9NXG0 1405 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 PRKAR2BP31323 418 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 AACSQ86V21 672 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
BPTF-208ENST00000544778 CCDC102AQ96A19 550 aa23.53■■□□□ 1.36
BPTF-208ENST00000544778 DRC1Q96MC2 740 aa23.53■■□□□ 1.36
BPTF-208ENST00000544778 COMMD10Q9Y6G5 202 aa23.53■■□□□ 1.36
BPTF-208ENST00000544778 SEC63Q9UGP8 760 aaKnown RBP23.53■■□□□ 1.36
BPTF-208ENST00000544778 STAMBPO95630 424 aa23.52■■□□□ 1.36
BPTF-208ENST00000544778 GOPCQ9HD26 462 aa23.52■■□□□ 1.36
BPTF-208ENST00000544778 PPP1R12BO60237 982 aaPredicted RBP23.52■■□□□ 1.35
BPTF-208ENST00000544778 SLC26A8Q96RN1 970 aa23.52■■□□□ 1.35
BPTF-208ENST00000544778 WDHD1O75717 1129 aaPredicted RBP23.51■■□□□ 1.35
BPTF-208ENST00000544778 CETN2P41208 172 aa23.51■■□□□ 1.35
BPTF-208ENST00000544778 EPB41L2O43491 1005 aaKnown RBP23.51■■□□□ 1.35
BPTF-208ENST00000544778 UBA5Q9GZZ9 404 aa23.51■■□□□ 1.35
BPTF-208ENST00000544778 GRIPAP1Q4V328 841 aa23.51■■□□□ 1.35
BPTF-208ENST00000544778 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
BPTF-208ENST00000544778 DHX8Q14562 1220 aaKnown RBP23.51■■□□□ 1.35
BPTF-208ENST00000544778 CRACR2BQ8N4Y2 399 aaPredicted RBP23.51■■□□□ 1.35
BPTF-208ENST00000544778 KRT85P78386 507 aa23.5■■□□□ 1.35
BPTF-208ENST00000544778 TXNDC2Q86VQ3 553 aa23.5■■□□□ 1.35
BPTF-208ENST00000544778 CTNNBL1Q8WYA6 563 aaPredicted RBP23.5■■□□□ 1.35
BPTF-208ENST00000544778 ABCF2Q9UG63 623 aa23.5■■□□□ 1.35
BPTF-208ENST00000544778 IGHMBP2P38935 993 aaKnown RBP23.5■■□□□ 1.35
BPTF-208ENST00000544778 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
BPTF-208ENST00000544778 SPATA32Q96LK8 384 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms