RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
CDK2AP1-206ENST00000544658 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
CDK2AP1-206ENST00000544658 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
CDK2AP1-206ENST00000544658 JCADQ9P266 1359 aa12.93□□□□□ -0.34
CDK2AP1-206ENST00000544658 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 GCP02774 474 aa12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
CDK2AP1-206ENST00000544658 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
CDK2AP1-206ENST00000544658 COG3Q96JB2 828 aa12.91□□□□□ -0.34
CDK2AP1-206ENST00000544658 LTN1O94822 1766 aa12.91□□□□□ -0.34
CDK2AP1-206ENST00000544658 COL18A1P39060 1754 aa12.91□□□□□ -0.34
CDK2AP1-206ENST00000544658 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
CDK2AP1-206ENST00000544658 CHRNA2Q15822 529 aa12.9□□□□□ -0.34
CDK2AP1-206ENST00000544658 MORC1Q86VD1 984 aa12.9□□□□□ -0.34
CDK2AP1-206ENST00000544658 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
CDK2AP1-206ENST00000544658 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
CDK2AP1-206ENST00000544658 CCDC184Q52MB2 194 aa12.89□□□□□ -0.35
CDK2AP1-206ENST00000544658 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
CDK2AP1-206ENST00000544658 NSD2O96028 1365 aa12.89□□□□□ -0.35
CDK2AP1-206ENST00000544658 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
CDK2AP1-206ENST00000544658 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 DIEXFQ68CQ4 756 aaKnown RBP12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 ARHGEF25Q86VW2 580 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
CDK2AP1-206ENST00000544658 ZBTB7CA1YPR0 619 aa12.87□□□□□ -0.35
CDK2AP1-206ENST00000544658 ILDR2Q71H61 639 aa12.86□□□□□ -0.35
CDK2AP1-206ENST00000544658 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
CDK2AP1-206ENST00000544658 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
CDK2AP1-206ENST00000544658 RGPD2P0DJD1 1756 aa12.85□□□□□ -0.35
CDK2AP1-206ENST00000544658 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
CDK2AP1-206ENST00000544658 CPDO75976 1380 aa12.84□□□□□ -0.35
CDK2AP1-206ENST00000544658 MTHFSP49914 203 aa12.84□□□□□ -0.35
CDK2AP1-206ENST00000544658 HSP90AB2PQ58FF8 381 aa12.84□□□□□ -0.35
CDK2AP1-206ENST00000544658 MIER1Q8N108 512 aa12.84□□□□□ -0.35
CDK2AP1-206ENST00000544658 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
CDK2AP1-206ENST00000544658 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.35
CDK2AP1-206ENST00000544658 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
CDK2AP1-206ENST00000544658 HOXC9P31274 260 aa12.83□□□□□ -0.36
CDK2AP1-206ENST00000544658 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
CDK2AP1-206ENST00000544658 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 RALBP1Q15311 655 aa12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
CDK2AP1-206ENST00000544658 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
CDK2AP1-206ENST00000544658 IP6K1Q92551 441 aa12.81□□□□□ -0.36
CDK2AP1-206ENST00000544658 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
CDK2AP1-206ENST00000544658 SLIT2O94813 1529 aa12.8□□□□□ -0.36
CDK2AP1-206ENST00000544658 ANP32CO43423 234 aa12.8□□□□□ -0.36
CDK2AP1-206ENST00000544658 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
CDK2AP1-206ENST00000544658 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CDK2AP1-206ENST00000544658 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
CDK2AP1-206ENST00000544658 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
CDK2AP1-206ENST00000544658 AMPHP49418 695 aa12.79□□□□□ -0.36
CDK2AP1-206ENST00000544658 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
CDK2AP1-206ENST00000544658 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 FLT4P35916 1363 aa12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
CDK2AP1-206ENST00000544658 IL13P35225 146 aa12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 STRN4Q9NRL3 753 aa12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 AFF2P51816 1311 aa12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 INSRP06213 1382 aa12.77□□□□□ -0.37
CDK2AP1-206ENST00000544658 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
CDK2AP1-206ENST00000544658 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
CDK2AP1-206ENST00000544658 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
CDK2AP1-206ENST00000544658 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
CDK2AP1-206ENST00000544658 RTL1A6NKG5 1358 aa12.75□□□□□ -0.37
CDK2AP1-206ENST00000544658 NBPF6Q5VWK0 638 aa12.75□□□□□ -0.37
CDK2AP1-206ENST00000544658 NBPF4Q96M43 638 aa12.75□□□□□ -0.37
CDK2AP1-206ENST00000544658 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 ABCC6O95255 1503 aa12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 ERBB3P21860 1342 aa12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 EYA1Q99502 592 aa12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 USP21Q9UK80 565 aa12.74□□□□□ -0.37
CDK2AP1-206ENST00000544658 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
CDK2AP1-206ENST00000544658 KIF24Q5T7B8 1368 aa12.73□□□□□ -0.37
CDK2AP1-206ENST00000544658 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
CDK2AP1-206ENST00000544658 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
CDK2AP1-206ENST00000544658 WDR17Q8IZU2 1322 aa12.72□□□□□ -0.37
CDK2AP1-206ENST00000544658 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
CDK2AP1-206ENST00000544658 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms