RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CEP126Q9P2H0 1117 aa4.73□□□□□ -1.65
YBX3-214ENST00000544501 ZNF777Q9ULD5 760 aaPredicted RBP4.73□□□□□ -1.65
YBX3-214ENST00000544501 TTC24A2A3L6 582 aaPredicted RBP4.72□□□□□ -1.65
YBX3-214ENST00000544501 ESPNB1AK53 854 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 TNFRSF10AO00220 468 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 GRM5P41594 1212 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 ARID5BQ14865 1188 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 LAPTM4AQ15012 233 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 NFATC2IPQ8NCF5 419 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 GLMNQ92990 594 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 CALR3Q96L12 384 aaKnown RBP4.72□□□□□ -1.65
YBX3-214ENST00000544501 PDZRN3Q9UPQ7 1066 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 TLL2Q9Y6L7 1015 aa4.72□□□□□ -1.65
YBX3-214ENST00000544501 GIGYF1O75420 1035 aaPredicted RBP4.71□□□□□ -1.66
YBX3-214ENST00000544501 ALDH1A1P00352 501 aa4.71□□□□□ -1.66
YBX3-214ENST00000544501 DHX9Q08211 1270 aaKnown RBP4.71□□□□□ -1.66
YBX3-214ENST00000544501 SLFNL1Q499Z3 407 aa4.71□□□□□ -1.66
YBX3-214ENST00000544501 PHTF2Q8N3S3 785 aa4.71□□□□□ -1.66
YBX3-214ENST00000544501 ADAMTS19Q8TE59 1207 aa4.71□□□□□ -1.66
YBX3-214ENST00000544501 WASF2Q9Y6W5 498 aa4.71□□□□□ -1.66
YBX3-214ENST00000544501 NRG2O14511 850 aaPredicted RBP4.7□□□□□ -1.66
YBX3-214ENST00000544501 LZTS3O60299 673 aaPredicted RBP4.7□□□□□ -1.66
YBX3-214ENST00000544501 MAP7D1Q3KQU3 841 aa4.7□□□□□ -1.66
YBX3-214ENST00000544501 SERPINA10Q9UK55 444 aa4.7□□□□□ -1.66
YBX3-214ENST00000544501 CHIC2Q9UKJ5 165 aa4.7□□□□□ -1.66
YBX3-214ENST00000544501 J3QL48 77 aa4.69□□□□□ -1.66
YBX3-214ENST00000544501 SMPD1P17405 629 aa4.69□□□□□ -1.66
YBX3-214ENST00000544501 FSHRP23945 695 aa4.69□□□□□ -1.66
YBX3-214ENST00000544501 INTS6LQ5JSJ4 861 aaKnown RBP4.69□□□□□ -1.66
YBX3-214ENST00000544501 RNF135Q8IUD6 432 aa4.69□□□□□ -1.66
YBX3-214ENST00000544501 CCDC116Q8IYX3 515 aa4.69□□□□□ -1.66
YBX3-214ENST00000544501 ARID3CA6NKF2 412 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 GFRA3O60609 400 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 DGAT1O75907 488 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 NNTQ13423 1086 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 UCN2Q96RP3 112 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 EMILIN1Q9Y6C2 1016 aa4.68□□□□□ -1.66
YBX3-214ENST00000544501 ERVH48-1M5A8F1 160 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 SUPT5HO00267 1087 aaKnown RBP4.67□□□□□ -1.66
YBX3-214ENST00000544501 ATP9BO43861 1147 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 AVPP01185 164 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 NR3C2P08235 984 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 PPP1R26Q5T8A7 1209 aaPredicted RBP4.67□□□□□ -1.66
YBX3-214ENST00000544501 PLEKHM2Q8IWE5 1019 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 SIRT1Q96EB6 747 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 CCDC97Q96F63 343 aaPredicted RBP4.67□□□□□ -1.66
YBX3-214ENST00000544501 KLF16Q9BXK1 252 aaPredicted RBP4.67□□□□□ -1.66
YBX3-214ENST00000544501 IRX2Q9BZI1 471 aaPredicted RBP4.67□□□□□ -1.66
YBX3-214ENST00000544501 PPP1R12CQ9BZL4 782 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 C1orf115Q9H7X2 142 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 PGPEP1Q9NXJ5 209 aa4.67□□□□□ -1.66
YBX3-214ENST00000544501 PALM3A6NDB9 673 aaPredicted RBP4.66□□□□□ -1.66
YBX3-214ENST00000544501 PIK3CDO00329 1044 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 SKIP12755 728 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 USP4Q13107 963 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 TRAF7Q6Q0C0 670 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 PLPP7Q8NBV4 271 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 HPS1Q92902 700 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 CCDC85AQ96PX6 553 aaPredicted RBP4.66□□□□□ -1.66
YBX3-214ENST00000544501 TFIP11Q9UBB9 837 aaKnown RBP4.66□□□□□ -1.66
YBX3-214ENST00000544501 DOLKQ9UPQ8 538 aa4.66□□□□□ -1.66
YBX3-214ENST00000544501 FAM187AA6NFU0 413 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 USP17L5A8MUK1 530 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 SMCPP49901 116 aaPredicted RBP4.65□□□□□ -1.67
YBX3-214ENST00000544501 WDR4P57081 412 aaKnown RBP4.65□□□□□ -1.67
YBX3-214ENST00000544501 RAB15P59190 212 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 ERVK-9P63128 1117 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 MYT1Q01538 1121 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 CTC1Q2NKJ3 1217 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 PKDCCQ504Y2 493 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 TBC1D9Q6ZT07 1266 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 CCDC82Q8N4S0 544 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 PCDHB11Q9Y5F2 797 aa4.65□□□□□ -1.67
YBX3-214ENST00000544501 USP17L3A6NCW0 530 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 USP17L4A6NCW7 530 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 ZIC2O95409 532 aaPredicted RBP4.64□□□□□ -1.67
YBX3-214ENST00000544501 MYCP01106 439 aaPredicted RBP4.64□□□□□ -1.67
YBX3-214ENST00000544501 TIMP2P16035 220 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 EML3Q32P44 896 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 TSGA10IPQ3SY00 556 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 CFAP70Q5T0N1 1121 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 CC2D2BQ6DHV5 1058 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 USP17L2Q6R6M4 530 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 Q6ZVU0 165 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 USP17L1Q7RTZ2 530 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 CRIPAKQ8N1N5 446 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 ZNF784Q8NCA9 323 aaPredicted RBP4.64□□□□□ -1.67
YBX3-214ENST00000544501 ITPKCQ96DU7 683 aa4.64□□□□□ -1.67
YBX3-214ENST00000544501 ESF1Q9H501 851 aaKnown RBP4.64□□□□□ -1.67
YBX3-214ENST00000544501 MAFBQ9Y5Q3 323 aaPredicted RBP4.64□□□□□ -1.67
YBX3-214ENST00000544501 CAPN5O15484 640 aaPredicted RBP4.63□□□□□ -1.67
YBX3-214ENST00000544501 LILRA1O75019 489 aa4.63□□□□□ -1.67
YBX3-214ENST00000544501 NCOA4Q13772 614 aa4.63□□□□□ -1.67
YBX3-214ENST00000544501 TRIM50Q86XT4 487 aa4.63□□□□□ -1.67
YBX3-214ENST00000544501 CDCA7Q9BWT1 371 aaPredicted RBP4.63□□□□□ -1.67
YBX3-214ENST00000544501 TMPRSS4Q9NRS4 437 aa4.63□□□□□ -1.67
YBX3-214ENST00000544501 NOD1Q9Y239 953 aa4.63□□□□□ -1.67
YBX3-214ENST00000544501 ATP5J2-PTCD1G3V325 749 aa4.62□□□□□ -1.67
YBX3-214ENST00000544501 PPP1R15AO75807 674 aaPredicted RBP4.62□□□□□ -1.67
YBX3-214ENST00000544501 LMOD1P29536 600 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms