RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
SP140-214ENST00000544128 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
SP140-214ENST00000544128 SPATA31A3Q5VYP0 1347 aa12.85□□□□□ -0.35
SP140-214ENST00000544128 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SP140-214ENST00000544128 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
SP140-214ENST00000544128 NLRP13Q86W25 1043 aa12.84□□□□□ -0.35
SP140-214ENST00000544128 C8orf37Q96NL8 207 aa12.84□□□□□ -0.35
SP140-214ENST00000544128 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
SP140-214ENST00000544128 ALS2Q96Q42 1657 aa12.83□□□□□ -0.35
SP140-214ENST00000544128 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
SP140-214ENST00000544128 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
SP140-214ENST00000544128 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
SP140-214ENST00000544128 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
SP140-214ENST00000544128 SOX12O15370 315 aa12.82□□□□□ -0.36
SP140-214ENST00000544128 FBLN1P23142 703 aa12.82□□□□□ -0.36
SP140-214ENST00000544128 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
SP140-214ENST00000544128 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
SP140-214ENST00000544128 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
SP140-214ENST00000544128 MARF1Q9Y4F3 1742 aaKnown RBP12.81□□□□□ -0.36
SP140-214ENST00000544128 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
SP140-214ENST00000544128 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
SP140-214ENST00000544128 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
SP140-214ENST00000544128 LRP5O75197 1615 aa12.8□□□□□ -0.36
SP140-214ENST00000544128 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
SP140-214ENST00000544128 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
SP140-214ENST00000544128 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
SP140-214ENST00000544128 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
SP140-214ENST00000544128 USP19O94966 1318 aa12.79□□□□□ -0.36
SP140-214ENST00000544128 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 GCP02774 474 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 MTHFSP49914 203 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
SP140-214ENST00000544128 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
SP140-214ENST00000544128 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
SP140-214ENST00000544128 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.37
SP140-214ENST00000544128 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 MRS2Q9HD23 443 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 SLIT3O75094 1523 aa12.77□□□□□ -0.37
SP140-214ENST00000544128 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
SP140-214ENST00000544128 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
SP140-214ENST00000544128 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
SP140-214ENST00000544128 ZC3H6P61129 1189 aaKnown RBP12.75□□□□□ -0.37
SP140-214ENST00000544128 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
SP140-214ENST00000544128 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
SP140-214ENST00000544128 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
SP140-214ENST00000544128 NFAT5O94916 1531 aa12.74□□□□□ -0.37
SP140-214ENST00000544128 AMPHP49418 695 aa12.74□□□□□ -0.37
SP140-214ENST00000544128 POLA2Q14181 598 aa12.74□□□□□ -0.37
SP140-214ENST00000544128 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
SP140-214ENST00000544128 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
SP140-214ENST00000544128 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
SP140-214ENST00000544128 USP21Q9UK80 565 aa12.73□□□□□ -0.37
SP140-214ENST00000544128 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
SP140-214ENST00000544128 LTN1O94822 1766 aa12.72□□□□□ -0.37
SP140-214ENST00000544128 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
SP140-214ENST00000544128 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
SP140-214ENST00000544128 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
SP140-214ENST00000544128 DEFB132Q7Z7B7 95 aa12.71□□□□□ -0.37
SP140-214ENST00000544128 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
SP140-214ENST00000544128 FLT4P35916 1363 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
SP140-214ENST00000544128 HOXC9P31274 260 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 IP6K1Q92551 441 aa12.7□□□□□ -0.38
SP140-214ENST00000544128 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
SP140-214ENST00000544128 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 CPDO75976 1380 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 INSRP06213 1382 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
SP140-214ENST00000544128 COL3A1P02461 1466 aaPredicted RBP12.68□□□□□ -0.38
SP140-214ENST00000544128 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
SP140-214ENST00000544128 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
SP140-214ENST00000544128 LTV1Q96GA3 475 aaPredicted RBP12.68□□□□□ -0.38
SP140-214ENST00000544128 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
SP140-214ENST00000544128 YY1P25490 414 aa12.67□□□□□ -0.38
SP140-214ENST00000544128 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
SP140-214ENST00000544128 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
SP140-214ENST00000544128 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
SP140-214ENST00000544128 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SP140-214ENST00000544128 ATRNO75882 1429 aa12.67□□□□□ -0.38
SP140-214ENST00000544128 COL18A1P39060 1754 aa12.66□□□□□ -0.38
SP140-214ENST00000544128 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
SP140-214ENST00000544128 FAM83GA6ND36 823 aa12.66□□□□□ -0.38
SP140-214ENST00000544128 IL13P35225 146 aa12.66□□□□□ -0.38
SP140-214ENST00000544128 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
SP140-214ENST00000544128 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
SP140-214ENST00000544128 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
SP140-214ENST00000544128 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
SP140-214ENST00000544128 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
SP140-214ENST00000544128 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
SP140-214ENST00000544128 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms