RNA–Protein interactions for RNA: ENST00000544032.5

DDX47-209, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-209ENST00000544032 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
DDX47-209ENST00000544032 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 METTL16Q86W50 562 aaKnown RBP12.45□□□□□ -0.42
DDX47-209ENST00000544032 IRF2BPLQ9H1B7 796 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 CAPN10Q9HC96 672 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
DDX47-209ENST00000544032 MAPK1P28482 360 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
DDX47-209ENST00000544032 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 NLRP7Q8WX94 980 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 GMLQ99445 158 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 TRIM34Q9BYJ4 488 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
DDX47-209ENST00000544032 SH3BP5O60239 455 aa12.43□□□□□ -0.42
DDX47-209ENST00000544032 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
DDX47-209ENST00000544032 RBL2Q08999 1139 aa12.43□□□□□ -0.42
DDX47-209ENST00000544032 C4orf46Q504U0 113 aa12.43□□□□□ -0.42
DDX47-209ENST00000544032 NPDC1Q9NQX5 325 aaPredicted RBP12.43□□□□□ -0.42
DDX47-209ENST00000544032 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 ZSCAN29Q8IWY8 852 aaPredicted RBP12.42□□□□□ -0.42
DDX47-209ENST00000544032 OSBPL2Q9H1P3 480 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 CDHR5Q9HBB8 845 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 PCDH12Q9NPG4 1184 aa12.42□□□□□ -0.42
DDX47-209ENST00000544032 GJA5P36382 358 aa12.41□□□□□ -0.42
DDX47-209ENST00000544032 MAF1Q9H063 256 aa12.41□□□□□ -0.42
DDX47-209ENST00000544032 OATP04181 439 aa12.4□□□□□ -0.42
DDX47-209ENST00000544032 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
DDX47-209ENST00000544032 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
DDX47-209ENST00000544032 HMX1Q9NP08 348 aaPredicted RBP12.4□□□□□ -0.42
DDX47-209ENST00000544032 DMGDHQ9UI17 866 aaKnown RBP12.4□□□□□ -0.42
DDX47-209ENST00000544032 DCTN4Q9UJW0 460 aa12.4□□□□□ -0.42
DDX47-209ENST00000544032 MCCP23508 829 aa12.39□□□□□ -0.43
DDX47-209ENST00000544032 FAM69CQ0P6D2 419 aa12.39□□□□□ -0.43
DDX47-209ENST00000544032 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
DDX47-209ENST00000544032 USP17L15C9J2P7 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L13C9JLJ4 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L11C9JVI0 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L21D6R901 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L18D6R9N7 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L22D6RA61 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L17D6RBQ6 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L19D6RCP7 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L20D6RJB6 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 H3BRB1 525 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 PAX3P23760 479 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 USP17L24Q0WX57 530 aa12.38□□□□□ -0.43
DDX47-209ENST00000544032 TUT1Q9H6E5 874 aaKnown RBP12.38□□□□□ -0.43
DDX47-209ENST00000544032 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
DDX47-209ENST00000544032 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
DDX47-209ENST00000544032 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
DDX47-209ENST00000544032 TBX4P57082 545 aa12.37□□□□□ -0.43
DDX47-209ENST00000544032 PPP1R3GB7ZBB8 358 aa12.36□□□□□ -0.43
DDX47-209ENST00000544032 RHBDL3P58872 404 aa12.36□□□□□ -0.43
DDX47-209ENST00000544032 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
DDX47-209ENST00000544032 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
DDX47-209ENST00000544032 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
DDX47-209ENST00000544032 PNISRQ8TF01 805 aaKnown RBP12.36□□□□□ -0.43
DDX47-209ENST00000544032 NUTM2BA6NNL0 878 aaPredicted RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 NUTM2EB1AL46 878 aaPredicted RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 HOXA2O43364 376 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 DNAJA1P31689 397 aaKnown RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 PBX2P40425 430 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 NUTM2DQ5VT03 806 aaPredicted RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 NUTM2AQ8IVF1 878 aaPredicted RBP12.35□□□□□ -0.43
DDX47-209ENST00000544032 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
DDX47-209ENST00000544032 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
DDX47-209ENST00000544032 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
DDX47-209ENST00000544032 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
DDX47-209ENST00000544032 RNF34Q969K3 372 aa12.34□□□□□ -0.43
DDX47-209ENST00000544032 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
DDX47-209ENST00000544032 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 ICMTO60725 284 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 FANCCQ00597 558 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 FOXD4Q12950 439 aaPredicted RBP12.33□□□□□ -0.44
DDX47-209ENST00000544032 USP17L2Q6R6M4 530 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 RGL4Q8IZJ4 473 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 DDX56Q9NY93 547 aaKnown RBP12.33□□□□□ -0.44
DDX47-209ENST00000544032 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.44
DDX47-209ENST00000544032 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
DDX47-209ENST00000544032 MRPL42Q9Y6G3 142 aaKnown RBP12.33□□□□□ -0.44
DDX47-209ENST00000544032 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
DDX47-209ENST00000544032 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms