RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 PHF14O94880 888 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 TRPM1Q7Z4N2 1603 aa15.76■□□□□ 0.11
TUBGCP2-210ENST00000543663 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 GNAI1P63096 354 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 LAMC1P11047 1609 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 FYB1O15117 783 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 CDC45O75419 566 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 MAP4K4O95819 1239 aaPredicted RBP15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
TUBGCP2-210ENST00000543663 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 TMEM57Q8N5G2 664 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 RLBP1P12271 317 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 NUCB2P80303 420 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
TUBGCP2-210ENST00000543663 FIBPO43427 364 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 ABTB2Q8N961 1025 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 GOLGA6L19H0YKK7 550 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 PDE4CQ08493 712 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 PSME1Q06323 249 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
TUBGCP2-210ENST00000543663 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 MYOM2P54296 1465 aa15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 HTATSF1O43719 755 aaKnown RBP15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 IFIT2P09913 472 aaKnown RBP15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
TUBGCP2-210ENST00000543663 GRPEL1Q9HAV7 217 aa15.71■□□□□ 0.11
TUBGCP2-210ENST00000543663 PIK3C2GO75747 1445 aa15.71■□□□□ 0.11
TUBGCP2-210ENST00000543663 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
TUBGCP2-210ENST00000543663 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
TUBGCP2-210ENST00000543663 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.1
TUBGCP2-210ENST00000543663 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
TUBGCP2-210ENST00000543663 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
TUBGCP2-210ENST00000543663 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
TUBGCP2-210ENST00000543663 SPC24Q8NBT2 197 aa15.7■□□□□ 0.1
TUBGCP2-210ENST00000543663 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 KRT24Q2M2I5 525 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 TBC1D2Q9BYX2 928 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 SBNO2Q9Y2G9 1366 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
TUBGCP2-210ENST00000543663 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 IL1RAPL2Q9NP60 686 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 ESPNB1AK53 854 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 ATP6V1DQ9Y5K8 247 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 NSD2O96028 1365 aa15.68■□□□□ 0.1
TUBGCP2-210ENST00000543663 TRIM27P14373 513 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 AAMPQ13685 434 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 RASSF8Q8NHQ8 419 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 FMNL2Q96PY5 1086 aa15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 UPF3BQ9BZI7 483 aaKnown RBP15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 SMARCA5O60264 1052 aaPredicted RBP15.67■□□□□ 0.1
TUBGCP2-210ENST00000543663 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
TUBGCP2-210ENST00000543663 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
TUBGCP2-210ENST00000543663 HSP90AB2PQ58FF8 381 aa15.66■□□□□ 0.1
TUBGCP2-210ENST00000543663 EXOC6BQ9Y2D4 811 aa15.66■□□□□ 0.1
TUBGCP2-210ENST00000543663 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 INO80Q9ULG1 1556 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 F6X3S4 739 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 STK11IPQ8N1F8 1099 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 APPP05067 770 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 EFCAB6Q5THR3 1501 aa15.65■□□□□ 0.1
TUBGCP2-210ENST00000543663 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.1
TUBGCP2-210ENST00000543663 C1orf141Q5JVX7 400 aa15.64■□□□□ 0.1
TUBGCP2-210ENST00000543663 CLSTN1O94985 981 aa15.64■□□□□ 0.09
TUBGCP2-210ENST00000543663 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
TUBGCP2-210ENST00000543663 SYNMO15061 1565 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 BLMP54132 1417 aaPredicted RBP15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 TSPYL6Q8N831 410 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 PANK2Q9BZ23 570 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 AMOTL2Q9Y2J4 779 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 NPATQ14207 1427 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 STK3Q13188 491 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 LMTK2Q8IWU2 1503 aa15.63■□□□□ 0.09
TUBGCP2-210ENST00000543663 E9PCH4 1651 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 SEC24BO95487 1268 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 TPM4P67936 248 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 HOMER1Q86YM7 354 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 RUFY2Q8WXA3 655 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 CLTCL1P53675 1640 aa15.62■□□□□ 0.09
TUBGCP2-210ENST00000543663 NFE2L2Q16236 605 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms