RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 CAMKK2Q96RR4 588 aa7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 BOLA1Q9Y3E2 137 aa7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 CCDC9Q9Y3X0 531 aaKnown RBP7.48□□□□□ -1.21
NPIPB4-219ENST00000543660 CDC42BPGQ6DT37 1551 aa7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 NUTM2FA1L443 756 aa7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 HOXB3P14651 431 aaPredicted RBP7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 HOXB1P14653 301 aaPredicted RBP7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 FAM98CQ17RN3 349 aaKnown RBP7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 ZNF710Q8N1W2 664 aa7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 CABLES1Q8TDN4 633 aa7.47□□□□□ -1.21
NPIPB4-219ENST00000543660 DOK7Q18PE1 504 aa7.46□□□□□ -1.22
NPIPB4-219ENST00000543660 KRT28Q7Z3Y7 464 aa7.46□□□□□ -1.22
NPIPB4-219ENST00000543660 NWD2Q9ULI1 1742 aa7.46□□□□□ -1.22
NPIPB4-219ENST00000543660 RGPD1P0DJD0 1748 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 CEP350Q5VT06 3117 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 A0A0G2JS52 829 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 VGFO15240 615 aaPredicted RBP7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 MYT1Q01538 1121 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 NBR1Q14596 966 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 DPY19L2Q6NUT2 758 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 ZNF784Q8NCA9 323 aaPredicted RBP7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 ROCK1Q13464 1354 aa7.45□□□□□ -1.22
NPIPB4-219ENST00000543660 PLCH1Q4KWH8 1693 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 CCDC144AA2RUR9 1427 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 NAIPQ13075 1403 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 LOC105371045A0A1W2PR82 267 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 RIMBP2O15034 1052 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 WAPLQ7Z5K2 1190 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 CABP2Q9NPB3 220 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 TNS3Q68CZ2 1445 aa7.44□□□□□ -1.22
NPIPB4-219ENST00000543660 CLTCL1P53675 1640 aa7.43□□□□□ -1.22
NPIPB4-219ENST00000543660 SENP3-EIF4A1A0A087X0R7 540 aa7.43□□□□□ -1.22
NPIPB4-219ENST00000543660 TRIM37O94972 964 aa7.43□□□□□ -1.22
NPIPB4-219ENST00000543660 ERBB3P21860 1342 aa7.43□□□□□ -1.22
NPIPB4-219ENST00000543660 NINLQ9Y2I6 1382 aa7.43□□□□□ -1.22
NPIPB4-219ENST00000543660 KCNQ2O43526 872 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 APBA3O96018 575 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 SPON1Q9HCB6 807 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 BTG4Q9NY30 223 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 SPATA31A5Q5VU36 1347 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 SPATA31A7Q8IWB4 1347 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 PARD3Q8TEW0 1356 aa7.42□□□□□ -1.22
NPIPB4-219ENST00000543660 NRAPQ86VF7 1730 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 C1QTNF8P60827 252 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 PSME1Q06323 249 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 FAM196AQ6ZSG2 479 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 BBXQ8WY36 941 aaPredicted RBP7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 RPGRIP1LQ68CZ1 1315 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 SBNO1A3KN83 1393 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 PLEKHH1Q9ULM0 1364 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 TECPR2O15040 1411 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 KIF1AQ12756 1690 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
NPIPB4-219ENST00000543660 NBPF8Q3BBV2 869 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 NBPF14Q5TI25 921 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 STK26Q9P289 416 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 PHF8Q9UPP1 1060 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 ARHGEF10O15013 1369 aa7.4□□□□□ -1.22
NPIPB4-219ENST00000543660 CAMTA1Q9Y6Y1 1673 aa7.4□□□□□ -1.23
NPIPB4-219ENST00000543660 ABCA3Q99758 1704 aa7.4□□□□□ -1.23
NPIPB4-219ENST00000543660 FMN2Q9NZ56 1722 aa7.39□□□□□ -1.23
NPIPB4-219ENST00000543660 ADGRB2O60241 1585 aa7.39□□□□□ -1.23
NPIPB4-219ENST00000543660 ABCC11Q96J66 1382 aa7.39□□□□□ -1.23
NPIPB4-219ENST00000543660 ZSWIM6Q9HCJ5 1215 aa7.39□□□□□ -1.23
NPIPB4-219ENST00000543660 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
NPIPB4-219ENST00000543660 KIF1BO60333 1816 aa7.38□□□□□ -1.23
NPIPB4-219ENST00000543660 NUP188Q5SRE5 1749 aa7.38□□□□□ -1.23
NPIPB4-219ENST00000543660 RREB1Q92766 1687 aa7.38□□□□□ -1.23
NPIPB4-219ENST00000543660 NRXN1Q9ULB1 1477 aa7.38□□□□□ -1.23
NPIPB4-219ENST00000543660 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
NPIPB4-219ENST00000543660 SPATA31A1Q5TZJ5 1347 aa7.37□□□□□ -1.23
NPIPB4-219ENST00000543660 ADGRF5Q8IZF2 1346 aa7.37□□□□□ -1.23
NPIPB4-219ENST00000543660 TMEM132EQ6IEE7 984 aa7.37□□□□□ -1.23
NPIPB4-219ENST00000543660 SPOCK2Q92563 424 aa7.37□□□□□ -1.23
NPIPB4-219ENST00000543660 RRBP1Q9P2E9 1410 aaKnown RBP7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 RGPD8O14715 1765 aaPredicted RBP7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 COL14A1Q05707 1796 aaKnown RBP7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 PTGER2P43116 358 aa7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 PPLO60437 1756 aa7.36□□□□□ -1.23
NPIPB4-219ENST00000543660 GOLGB1Q14789 3259 aaKnown RBP7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 ZNF687Q8N1G0 1237 aa7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 PMFBP1Q8TBY8 1022 aa7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 CFAP44Q96MT7 982 aa7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 PDGFDQ9GZP0 370 aaPredicted RBP7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 CIZ1Q9ULV3 898 aaPredicted RBP7.35□□□□□ -1.23
NPIPB4-219ENST00000543660 ITGAEP38570 1179 aa7.34□□□□□ -1.23
NPIPB4-219ENST00000543660 SYT17Q9BSW7 474 aa7.34□□□□□ -1.23
NPIPB4-219ENST00000543660 ANO8Q9HCE9 1232 aaPredicted RBP7.34□□□□□ -1.23
NPIPB4-219ENST00000543660 PRDM11Q9NQV5 511 aa7.34□□□□□ -1.23
NPIPB4-219ENST00000543660 YTHDC2Q9H6S0 1430 aaKnown RBP7.34□□□□□ -1.23
NPIPB4-219ENST00000543660 NRKQ7Z2Y5 1582 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms