RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 TCOF1Q13428 1488 aaKnown RBP7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 GPATCH8Q9UKJ3 1502 aaKnown RBP7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 EFCAB2Q5VUJ9 269 aa7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
SPARCL1-210ENST00000543631 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
SPARCL1-210ENST00000543631 ABCC10Q5T3U5 1492 aa7.43□□□□□ -1.22
SPARCL1-210ENST00000543631 PLEKHH2Q8IVE3 1493 aa7.43□□□□□ -1.22
SPARCL1-210ENST00000543631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.43□□□□□ -1.22
SPARCL1-210ENST00000543631 TERTO14746 1132 aaKnown RBP7.43□□□□□ -1.22
SPARCL1-210ENST00000543631 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
SPARCL1-210ENST00000543631 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
SPARCL1-210ENST00000543631 SETD5Q9C0A6 1442 aa7.42□□□□□ -1.22
SPARCL1-210ENST00000543631 TTC37Q6PGP7 1564 aa7.42□□□□□ -1.22
SPARCL1-210ENST00000543631 DNMT1P26358 1616 aaKnown RBP7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 CHIC2Q9UKJ5 165 aa7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 DAPK1P53355 1430 aa7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 CFAP74Q9C0B2 1584 aa7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 ABCA9Q8IUA7 1624 aa7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 ADGBQ8N7X0 1667 aa7.41□□□□□ -1.22
SPARCL1-210ENST00000543631 Q3C1V9 767 aa7.4□□□□□ -1.22
SPARCL1-210ENST00000543631 PLCH2O75038 1416 aa7.4□□□□□ -1.22
SPARCL1-210ENST00000543631 MAPKBP1O60336 1514 aa7.4□□□□□ -1.22
SPARCL1-210ENST00000543631 CROCC2H7BZ55 1655 aa7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 ARAP3Q8WWN8 1544 aa7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 ANKRD30AQ9BXX3 1397 aa7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 ZNF644Q9H582 1327 aaPredicted RBP7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 SMYD5Q6GMV2 418 aa7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 RRP7BPQ9NSQ0 103 aa7.39□□□□□ -1.23
SPARCL1-210ENST00000543631 GCC2Q8IWJ2 1684 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 CCDC141Q6ZP82 1450 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 RAB3GAP2Q9H2M9 1393 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 SIAH2O43255 324 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 KDM4AO75164 1064 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 HRCP23327 699 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 HNRNPMP52272 730 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 GRIPAP1Q4V328 841 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 TRIM52Q96A61 297 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 SENP2Q9HC62 589 aa7.38□□□□□ -1.23
SPARCL1-210ENST00000543631 ARHGEF5Q12774 1597 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 SAMD9LQ8IVG5 1584 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 FANCAO15360 1455 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 HFM1A2PYH4 1435 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 AKNAQ7Z591 1439 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 ROCK1Q13464 1354 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 HOXA2O43364 376 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 WNT7BP56706 349 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 GPIHBP1Q8IV16 184 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 SYCP2Q9BX26 1530 aa7.37□□□□□ -1.23
SPARCL1-210ENST00000543631 SHANK2Q9UPX8 1470 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 ABCC5O15440 1437 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 KIAA1107Q9UPP5 1409 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 FAM69CQ0P6D2 419 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 TRIM46Q7Z4K8 759 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 TSPOAP1O95153 1857 aa7.36□□□□□ -1.23
SPARCL1-210ENST00000543631 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
SPARCL1-210ENST00000543631 CLSPNQ9HAW4 1339 aa7.35□□□□□ -1.23
SPARCL1-210ENST00000543631 MAP2K5Q13163 448 aa7.35□□□□□ -1.23
SPARCL1-210ENST00000543631 PTCRAQ6ISU1 281 aaPredicted RBP7.35□□□□□ -1.23
SPARCL1-210ENST00000543631 ADGRL1O94910 1474 aa7.35□□□□□ -1.23
SPARCL1-210ENST00000543631 GLI2P10070 1586 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 SPAG9O60271 1321 aaKnown RBP7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 ABCC1P33527 1531 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 TEX14Q8IWB6 1497 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 NAIPQ13075 1403 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 PTPRKQ15262 1439 aa7.34□□□□□ -1.23
SPARCL1-210ENST00000543631 ADGRL2O95490 1459 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 NEO1Q92859 1461 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 JUNDP17535 347 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 USP46P62068 366 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 CCDC24Q8N4L8 307 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 NCOA1Q15788 1441 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 SCAPERQ9BY12 1400 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 DIP2BQ9P265 1576 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 MAST1Q9Y2H9 1570 aa7.33□□□□□ -1.24
SPARCL1-210ENST00000543631 MBD5Q9P267 1494 aa7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 IRF6O14896 467 aa7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 BMP1P13497 986 aa7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 DHX57Q6P158 1386 aaKnown RBP7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 KIF15Q9NS87 1388 aa7.32□□□□□ -1.24
SPARCL1-210ENST00000543631 ZNF518AQ6AHZ1 1483 aa7.31□□□□□ -1.24
SPARCL1-210ENST00000543631 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
SPARCL1-210ENST00000543631 GMPRP36959 345 aa7.31□□□□□ -1.24
SPARCL1-210ENST00000543631 ANKRD50Q9ULJ7 1429 aa7.31□□□□□ -1.24
SPARCL1-210ENST00000543631 DENND4BO75064 1496 aaPredicted RBP7.3□□□□□ -1.24
SPARCL1-210ENST00000543631 PLXNC1O60486 1568 aa7.3□□□□□ -1.24
SPARCL1-210ENST00000543631 RTEL1-TNFRSF6BF6WH68 1400 aa7.3□□□□□ -1.24
SPARCL1-210ENST00000543631 KIF13AQ9H1H9 1805 aa7.3□□□□□ -1.24
SPARCL1-210ENST00000543631 NXF1Q9UBU9 619 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms