RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 TOM1L2Q6ZVM7 507 aa10.2□□□□□ -0.78
TRIM59-208ENST00000543469 SULT6B1Q6IMI4 303 aa10.2□□□□□ -0.78
TRIM59-208ENST00000543469 BABAM1Q9NWV8 329 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 KIF16BQ96L93 1317 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 TNS3Q68CZ2 1445 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 GCP02774 474 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 POLKQ9UBT6 870 aa10.19□□□□□ -0.78
TRIM59-208ENST00000543469 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
TRIM59-208ENST00000543469 ZNF335Q9H4Z2 1342 aaPredicted RBP10.18□□□□□ -0.78
TRIM59-208ENST00000543469 PRR36Q9H6K5 1346 aa10.18□□□□□ -0.78
TRIM59-208ENST00000543469 BLMP54132 1417 aaPredicted RBP10.18□□□□□ -0.78
TRIM59-208ENST00000543469 RRS1Q15050 365 aaKnown RBP10.18□□□□□ -0.78
TRIM59-208ENST00000543469 API5Q9BZZ5 524 aaKnown RBP10.18□□□□□ -0.78
TRIM59-208ENST00000543469 GNAT3A8MTJ3 354 aa10.17□□□□□ -0.78
TRIM59-208ENST00000543469 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
TRIM59-208ENST00000543469 IFT57Q9NWB7 429 aa10.17□□□□□ -0.78
TRIM59-208ENST00000543469 ANKRD24Q8TF21 1146 aa10.17□□□□□ -0.78
TRIM59-208ENST00000543469 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
TRIM59-208ENST00000543469 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
TRIM59-208ENST00000543469 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 HMOX1P09601 288 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 HOXC9P31274 260 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 TMPOP42166 694 aaKnown RBP10.16□□□□□ -0.78
TRIM59-208ENST00000543469 FKBP8Q14318 412 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
TRIM59-208ENST00000543469 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 PLEKHG2Q9H7P9 1386 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 NRXN3Q9Y4C0 1643 aa10.16□□□□□ -0.78
TRIM59-208ENST00000543469 XPCQ01831 940 aaPredicted RBP10.15□□□□□ -0.78
TRIM59-208ENST00000543469 SPATA31A3Q5VYP0 1347 aa10.15□□□□□ -0.78
TRIM59-208ENST00000543469 ZC3H6P61129 1189 aaKnown RBP10.15□□□□□ -0.78
TRIM59-208ENST00000543469 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
TRIM59-208ENST00000543469 TSPYL4Q9UJ04 414 aa10.15□□□□□ -0.78
TRIM59-208ENST00000543469 MAP3K19Q56UN5 1328 aa10.15□□□□□ -0.79
TRIM59-208ENST00000543469 IQSEC2Q5JU85 1478 aa10.14□□□□□ -0.79
TRIM59-208ENST00000543469 IFNL2Q8IZJ0 200 aa10.14□□□□□ -0.79
TRIM59-208ENST00000543469 ZKSCAN2Q63HK3 967 aa10.14□□□□□ -0.79
TRIM59-208ENST00000543469 HSP90B1P14625 803 aaKnown RBP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 CHD2O14647 1828 aaKnown RBP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 FMN2Q9NZ56 1722 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 LRRC7Q96NW7 1537 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 TEX13AQ9BXU3 409 aaPredicted RBP10.13□□□□□ -0.79
TRIM59-208ENST00000543469 MST1RQ04912 1400 aa10.13□□□□□ -0.79
TRIM59-208ENST00000543469 AKAP4Q5JQC9 854 aa10.12□□□□□ -0.79
TRIM59-208ENST00000543469 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
TRIM59-208ENST00000543469 IL13P35225 146 aa10.12□□□□□ -0.79
TRIM59-208ENST00000543469 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
TRIM59-208ENST00000543469 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
TRIM59-208ENST00000543469 HMMRO75330 724 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 CABP4P57796 275 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 RRP7AQ9Y3A4 280 aaKnown RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 NUTM2BA6NNL0 878 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 NUTM2EB1AL46 878 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 NUTM2AQ8IVF1 878 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 NGLY1Q96IV0 654 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 OVOS2A0A0J9YW53 1432 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 OVOS2Q6IE36 1432 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 WWC1Q8IX03 1113 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 FRAT1Q92837 279 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 EXOC5O00471 708 aa10.11□□□□□ -0.79
TRIM59-208ENST00000543469 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
TRIM59-208ENST00000543469 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 IL2RBP14784 551 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 THRAP3Q9Y2W1 955 aaKnown RBP10.1□□□□□ -0.79
TRIM59-208ENST00000543469 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 JCADQ9P266 1359 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 USP19O94966 1318 aa10.1□□□□□ -0.79
TRIM59-208ENST00000543469 RWDD1Q9H446 243 aaPredicted RBP10.1□□□□□ -0.79
TRIM59-208ENST00000543469 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
TRIM59-208ENST00000543469 DDX19BQ9UMR2 479 aa10.09□□□□□ -0.79
TRIM59-208ENST00000543469 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
TRIM59-208ENST00000543469 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
TRIM59-208ENST00000543469 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
TRIM59-208ENST00000543469 PNPLA6Q8IY17 1366 aa10.08□□□□□ -0.8
TRIM59-208ENST00000543469 RRP1P56182 461 aaKnown RBP10.08□□□□□ -0.8
TRIM59-208ENST00000543469 HSP90AB2PQ58FF8 381 aa10.08□□□□□ -0.8
TRIM59-208ENST00000543469 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
TRIM59-208ENST00000543469 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
TRIM59-208ENST00000543469 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
TRIM59-208ENST00000543469 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
TRIM59-208ENST00000543469 SETD1AO15047 1707 aaKnown RBP10.08□□□□□ -0.8
TRIM59-208ENST00000543469 IGSF1Q8N6C5 1336 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 ABCC6O95255 1503 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 DCAF5Q96JK2 942 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 UPF2Q9HAU5 1272 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms