RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.49
TCF4-208ENST00000543082 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.5
TCF4-208ENST00000543082 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.5
TCF4-208ENST00000543082 TMPOP42166 694 aaKnown RBP11.94□□□□□ -0.5
TCF4-208ENST00000543082 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
TCF4-208ENST00000543082 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 MBD3O95983 291 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 ADGRF5Q8IZF2 1346 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
TCF4-208ENST00000543082 ARID3AQ99856 593 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 SPAG9O60271 1321 aaKnown RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 PIK3R4Q99570 1358 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 PTMAP06454 111 aaKnown RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 HMGN5P82970 282 aaKnown RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 SLC12A5Q9H2X9 1139 aa11.93□□□□□ -0.5
TCF4-208ENST00000543082 COL3A1P02461 1466 aaPredicted RBP11.93□□□□□ -0.5
TCF4-208ENST00000543082 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
TCF4-208ENST00000543082 PLEKHF1Q96S99 279 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
TCF4-208ENST00000543082 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 ZHX1Q9UKY1 873 aaPredicted RBP11.92□□□□□ -0.5
TCF4-208ENST00000543082 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 SYCE3A1L190 88 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 ST18O60284 1047 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 ZSCAN20P17040 1043 aaPredicted RBP11.92□□□□□ -0.5
TCF4-208ENST00000543082 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 ZCCHC11Q5TAX3 1644 aaKnown RBP11.92□□□□□ -0.5
TCF4-208ENST00000543082 PPLO60437 1756 aa11.92□□□□□ -0.5
TCF4-208ENST00000543082 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
TCF4-208ENST00000543082 GTF2F1P35269 517 aaKnown RBP eCLIP11.91□□□□□ -0.5
TCF4-208ENST00000543082 ADGRB3O60242 1522 aa11.91□□□□□ -0.5
TCF4-208ENST00000543082 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
TCF4-208ENST00000543082 FANCAO15360 1455 aa11.91□□□□□ -0.5
TCF4-208ENST00000543082 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
TCF4-208ENST00000543082 PKP1Q13835 747 aa11.9□□□□□ -0.5
TCF4-208ENST00000543082 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
TCF4-208ENST00000543082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
TCF4-208ENST00000543082 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
TCF4-208ENST00000543082 KIF20AO95235 890 aa11.9□□□□□ -0.51
TCF4-208ENST00000543082 DNTTIP2Q5QJE6 756 aaKnown RBP11.9□□□□□ -0.51
TCF4-208ENST00000543082 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.51
TCF4-208ENST00000543082 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.51
TCF4-208ENST00000543082 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
TCF4-208ENST00000543082 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
TCF4-208ENST00000543082 CHD1O14646 1710 aa11.89□□□□□ -0.51
TCF4-208ENST00000543082 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
TCF4-208ENST00000543082 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
TCF4-208ENST00000543082 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
TCF4-208ENST00000543082 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
TCF4-208ENST00000543082 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
TCF4-208ENST00000543082 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
TCF4-208ENST00000543082 LMTK2Q8IWU2 1503 aa11.88□□□□□ -0.51
TCF4-208ENST00000543082 PHF14O94880 888 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
TCF4-208ENST00000543082 UHRF1BP1LA0JNW5 1464 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 ZGPATQ8N5A5 531 aaKnown RBP11.87□□□□□ -0.51
TCF4-208ENST00000543082 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 CDC42BPGQ6DT37 1551 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 TULP4Q9NRJ4 1543 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 ABCC4O15439 1325 aa11.87□□□□□ -0.51
TCF4-208ENST00000543082 UVSSAQ2YD98 709 aa11.86□□□□□ -0.51
TCF4-208ENST00000543082 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
TCF4-208ENST00000543082 FAM184AQ8NB25 1140 aa11.86□□□□□ -0.51
TCF4-208ENST00000543082 C14orf93Q9H972 538 aaKnown RBP11.86□□□□□ -0.51
TCF4-208ENST00000543082 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
TCF4-208ENST00000543082 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
TCF4-208ENST00000543082 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
TCF4-208ENST00000543082 ABCA9Q8IUA7 1624 aa11.85□□□□□ -0.51
TCF4-208ENST00000543082 GLI2P10070 1586 aa11.85□□□□□ -0.51
TCF4-208ENST00000543082 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCF4-208ENST00000543082 MRPL50Q8N5N7 158 aaKnown RBP11.85□□□□□ -0.51
TCF4-208ENST00000543082 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
TCF4-208ENST00000543082 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
TCF4-208ENST00000543082 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 REC8O95072 547 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 FGD1P98174 961 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 CBX1P83916 185 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
TCF4-208ENST00000543082 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
TCF4-208ENST00000543082 KIF3BO15066 747 aa11.83□□□□□ -0.52
TCF4-208ENST00000543082 BRD1O95696 1058 aa11.83□□□□□ -0.52
TCF4-208ENST00000543082 MCM2P49736 904 aa11.83□□□□□ -0.52
TCF4-208ENST00000543082 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms