RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
KDM2B-216ENST00000543025 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
KDM2B-216ENST00000543025 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
KDM2B-216ENST00000543025 CDC42BPGQ6DT37 1551 aa20.97■□□□□ 0.95
KDM2B-216ENST00000543025 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
KDM2B-216ENST00000543025 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
KDM2B-216ENST00000543025 TMEM57Q8N5G2 664 aa20.96■□□□□ 0.95
KDM2B-216ENST00000543025 CDK19Q9BWU1 502 aa20.96■□□□□ 0.95
KDM2B-216ENST00000543025 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.95
KDM2B-216ENST00000543025 NWD1Q149M9 1564 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 FCHSD2O94868 740 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 ALDH1L2Q3SY69 923 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 C22orf23Q9BZE7 217 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 ZBTB40Q9NUA8 1239 aa20.95■□□□□ 0.94
KDM2B-216ENST00000543025 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
KDM2B-216ENST00000543025 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
KDM2B-216ENST00000543025 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
KDM2B-216ENST00000543025 KCNA6P17658 529 aa20.92■□□□□ 0.94
KDM2B-216ENST00000543025 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
KDM2B-216ENST00000543025 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
KDM2B-216ENST00000543025 STRCP1A6NGW2 1772 aa20.91■□□□□ 0.94
KDM2B-216ENST00000543025 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.91■□□□□ 0.94
KDM2B-216ENST00000543025 RSPH6AQ9H0K4 717 aa20.9■□□□□ 0.94
KDM2B-216ENST00000543025 PPIP5K1Q6PFW1 1433 aa20.9■□□□□ 0.94
KDM2B-216ENST00000543025 ATP7BP35670 1465 aa20.89■□□□□ 0.93
KDM2B-216ENST00000543025 PRKAR2BP31323 418 aa20.89■□□□□ 0.93
KDM2B-216ENST00000543025 BRPF1P55201 1214 aaPredicted RBP20.89■□□□□ 0.93
KDM2B-216ENST00000543025 NUCB1Q02818 461 aa20.87■□□□□ 0.93
KDM2B-216ENST00000543025 POLKQ9UBT6 870 aa20.87■□□□□ 0.93
KDM2B-216ENST00000543025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.86■□□□□ 0.934e-6■■□□□ 11.7
KDM2B-216ENST00000543025 CALD1Q05682 793 aaKnown RBP20.85■□□□□ 0.93
KDM2B-216ENST00000543025 NALCNQ8IZF0 1738 aa20.84■□□□□ 0.93
KDM2B-216ENST00000543025 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
KDM2B-216ENST00000543025 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
KDM2B-216ENST00000543025 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
KDM2B-216ENST00000543025 SPRYD3Q8NCJ5 442 aa20.84■□□□□ 0.93
KDM2B-216ENST00000543025 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
KDM2B-216ENST00000543025 CHMP5Q9NZZ3 219 aa20.83■□□□□ 0.93
KDM2B-216ENST00000543025 L1TD1Q5T7N2 865 aaKnown RBP20.82■□□□□ 0.92
KDM2B-216ENST00000543025 HSCBQ8IWL3 235 aa20.82■□□□□ 0.92
KDM2B-216ENST00000543025 LNPKQ9C0E8 428 aa20.82■□□□□ 0.92
KDM2B-216ENST00000543025 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
KDM2B-216ENST00000543025 FBLN1P23142 703 aa20.81■□□□□ 0.92
KDM2B-216ENST00000543025 MAP2P11137 1827 aaKnown RBP20.81■□□□□ 0.92
KDM2B-216ENST00000543025 VAMP4O75379 141 aa20.81■□□□□ 0.92
KDM2B-216ENST00000543025 MCM4P33991 863 aa20.81■□□□□ 0.92
KDM2B-216ENST00000543025 RBM25P49756 843 aaKnown RBP20.81■□□□□ 0.92
KDM2B-216ENST00000543025 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
KDM2B-216ENST00000543025 ZBTB7BO15156 539 aaPredicted RBP20.8■□□□□ 0.92
KDM2B-216ENST00000543025 HMOX1P09601 288 aa20.8■□□□□ 0.92
KDM2B-216ENST00000543025 GNAI1P63096 354 aa20.8■□□□□ 0.92
KDM2B-216ENST00000543025 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
KDM2B-216ENST00000543025 IFT57Q9NWB7 429 aa20.8■□□□□ 0.92
KDM2B-216ENST00000543025 MRPL50Q8N5N7 158 aaKnown RBP20.79■□□□□ 0.92
KDM2B-216ENST00000543025 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
KDM2B-216ENST00000543025 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
KDM2B-216ENST00000543025 BMP2KLQ5H9B9 411 aa20.79■□□□□ 0.92
KDM2B-216ENST00000543025 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
KDM2B-216ENST00000543025 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
KDM2B-216ENST00000543025 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
KDM2B-216ENST00000543025 CPSF1Q10570 1443 aaKnown RBP20.78■□□□□ 0.92
KDM2B-216ENST00000543025 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
KDM2B-216ENST00000543025 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
KDM2B-216ENST00000543025 EMILIN1Q9Y6C2 1016 aa20.77■□□□□ 0.92
KDM2B-216ENST00000543025 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
KDM2B-216ENST00000543025 IL13P35225 146 aa20.77■□□□□ 0.92
KDM2B-216ENST00000543025 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
KDM2B-216ENST00000543025 NCOA3Q9Y6Q9 1424 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 ZNF853P0CG23 659 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
KDM2B-216ENST00000543025 TSPYL6Q8N831 410 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 SNX21Q969T3 373 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 ADGRL3Q9HAR2 1447 aa20.76■□□□□ 0.91
KDM2B-216ENST00000543025 ANKRD45Q5TZF3 282 aa20.75■□□□□ 0.91
KDM2B-216ENST00000543025 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
KDM2B-216ENST00000543025 LMOD3Q0VAK6 560 aa20.75■□□□□ 0.91
KDM2B-216ENST00000543025 ABCC4O15439 1325 aa20.75■□□□□ 0.91
KDM2B-216ENST00000543025 FMN2Q9NZ56 1722 aa20.75■□□□□ 0.91
KDM2B-216ENST00000543025 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
KDM2B-216ENST00000543025 NME9Q86XW9 330 aa20.73■□□□□ 0.91
KDM2B-216ENST00000543025 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
KDM2B-216ENST00000543025 C1orf115Q9H7X2 142 aa20.73■□□□□ 0.91
KDM2B-216ENST00000543025 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
KDM2B-216ENST00000543025 CFAP44Q96MT7 982 aa20.72■□□□□ 0.91
KDM2B-216ENST00000543025 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
KDM2B-216ENST00000543025 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
KDM2B-216ENST00000543025 RGPD8O14715 1765 aaPredicted RBP20.71■□□□□ 0.91
KDM2B-216ENST00000543025 GOLGA6L3A6NEY3 463 aa20.71■□□□□ 0.91
KDM2B-216ENST00000543025 DDIT3P35638 169 aa20.71■□□□□ 0.91
KDM2B-216ENST00000543025 DDX11L8A8MPP1 907 aa20.7■□□□□ 0.9
KDM2B-216ENST00000543025 COG3Q96JB2 828 aa20.7■□□□□ 0.9
KDM2B-216ENST00000543025 TRAK2O60296 914 aa20.7■□□□□ 0.9
KDM2B-216ENST00000543025 C14orf37Q86TY3 774 aa20.7■□□□□ 0.9
KDM2B-216ENST00000543025 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
KDM2B-216ENST00000543025 FSD2A1L4K1 749 aa20.69■□□□□ 0.9
KDM2B-216ENST00000543025 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
KDM2B-216ENST00000543025 PRR36Q9H6K5 1346 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms