RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 ABCC6O95255 1503 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 EVC2Q86UK5 1308 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 U2AF1L5P0DN76 240 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-209ENST00000542879 U2AF1Q01081 240 aaKnown RBP eCLIP7.08□□□□□ -1.28
ZEB1-209ENST00000542879 PIK3R4Q99570 1358 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 TUBGCP6Q96RT7 1819 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 MRE11P49959 708 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 BRPF1P55201 1214 aaPredicted RBP7.08□□□□□ -1.28
ZEB1-209ENST00000542879 SPRYD3Q8NCJ5 442 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 KIF2CQ99661 725 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 ISY1Q9ULR0 285 aaKnown RBP7.08□□□□□ -1.28
ZEB1-209ENST00000542879 TMEM57Q8N5G2 664 aa7.07□□□□□ -1.28
ZEB1-209ENST00000542879 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
ZEB1-209ENST00000542879 WNK3Q9BYP7 1800 aa7.07□□□□□ -1.28
ZEB1-209ENST00000542879 AKAP12Q02952 1782 aa7.07□□□□□ -1.28
ZEB1-209ENST00000542879 DDX11L8A8MPP1 907 aa7.07□□□□□ -1.28
ZEB1-209ENST00000542879 RBM10P98175 930 aaKnown RBP7.07□□□□□ -1.28
ZEB1-209ENST00000542879 NOB1Q9ULX3 412 aaKnown RBP7.07□□□□□ -1.28
ZEB1-209ENST00000542879 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
ZEB1-209ENST00000542879 CHRM1P11229 460 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-209ENST00000542879 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 ITPRIPQ8IWB1 547 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 HSCBQ8IWL3 235 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 CIZ1Q9ULV3 898 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-209ENST00000542879 FAM135BQ49AJ0 1406 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 NPM1P06748 294 aaKnown RBP eCLIP7.06□□□□□ -1.28
ZEB1-209ENST00000542879 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 ALDH1L2Q3SY69 923 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 GRPEL1Q9HAV7 217 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 KIF16BQ96L93 1317 aa7.06□□□□□ -1.28
ZEB1-209ENST00000542879 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
ZEB1-209ENST00000542879 AHDC1Q5TGY3 1603 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-209ENST00000542879 GTF2E1P29083 439 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-209ENST00000542879 BMP2KLQ5H9B9 411 aa7.05□□□□□ -1.28
ZEB1-209ENST00000542879 TNPO1Q92973 898 aaKnown RBP7.05□□□□□ -1.28
ZEB1-209ENST00000542879 ERBB4Q15303 1308 aa7.05□□□□□ -1.28
ZEB1-209ENST00000542879 TRPM3Q9HCF6 1732 aaPredicted RBP7.05□□□□□ -1.28
ZEB1-209ENST00000542879 CLEC17AQ6ZS10 378 aa7.05□□□□□ -1.28
ZEB1-209ENST00000542879 CHD1LQ86WJ1 897 aa7.05□□□□□ -1.28
ZEB1-209ENST00000542879 CABP2Q9NPB3 220 aa7.05□□□□□ -1.28
ZEB1-209ENST00000542879 GAS2L3Q86XJ1 694 aa7.04□□□□□ -1.28
ZEB1-209ENST00000542879 FYB1O15117 783 aa7.04□□□□□ -1.28
ZEB1-209ENST00000542879 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ZEB1-209ENST00000542879 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
ZEB1-209ENST00000542879 CHGAP10645 457 aaKnown RBP7.03□□□□□ -1.28
ZEB1-209ENST00000542879 DCCP43146 1447 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 ATAD2Q6PL18 1390 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-209ENST00000542879 ZNF428Q96B54 188 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 IPO8O15397 1037 aaKnown RBP7.03□□□□□ -1.28
ZEB1-209ENST00000542879 RIPK4P57078 832 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 FAM69CQ0P6D2 419 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 GGNBP2Q9H3C7 697 aa7.03□□□□□ -1.28
ZEB1-209ENST00000542879 IBTKQ9P2D0 1353 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-209ENST00000542879 VGFO15240 615 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 LNPKQ9C0E8 428 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 PLCH1Q4KWH8 1693 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 ALS2Q96Q42 1657 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 MON2Q7Z3U7 1717 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 U2SURPO15042 1029 aaKnown RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 ARHGAP45Q92619 1136 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 GCC1Q96CN9 775 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 ARXQ96QS3 562 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 ABCC4O15439 1325 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 YTHDC2Q9H6S0 1430 aaKnown RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 ESPNB1AK53 854 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 PTMSP20962 102 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 SKOR2Q2VWA4 1001 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 SIRT2Q8IXJ6 389 aa7.02□□□□□ -1.29
ZEB1-209ENST00000542879 MRPL50Q8N5N7 158 aaKnown RBP7.02□□□□□ -1.29
ZEB1-209ENST00000542879 TBC1D9Q6ZT07 1266 aa7.01□□□□□ -1.29
ZEB1-209ENST00000542879 DIAPH1O60610 1272 aaKnown RBP7.01□□□□□ -1.29
ZEB1-209ENST00000542879 FCHSD2O94868 740 aa7.01□□□□□ -1.29
ZEB1-209ENST00000542879 CALD1Q05682 793 aaKnown RBP7.01□□□□□ -1.29
ZEB1-209ENST00000542879 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
ZEB1-209ENST00000542879 K7ELQ4 463 aaPredicted RBP7.01□□□□□ -1.29
ZEB1-209ENST00000542879 VAMP4O75379 141 aa7.01□□□□□ -1.29
ZEB1-209ENST00000542879 ATP7BP35670 1465 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 ZNF853P0CG23 659 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 GLIPR1L2Q4G1C9 344 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 PPP1R9BQ96SB3 815 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 KIF24Q5T7B8 1368 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 CICQ96RK0 1608 aaPredicted RBP7□□□□□ -1.29
ZEB1-209ENST00000542879 HSP90AB1P08238 724 aaKnown RBP7□□□□□ -1.29
ZEB1-209ENST00000542879 RGPD3A6NKT7 1758 aaPredicted RBP7□□□□□ -1.29
ZEB1-209ENST00000542879 RGPD4Q7Z3J3 1758 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 GAS2L2Q8NHY3 880 aa7□□□□□ -1.29
ZEB1-209ENST00000542879 NAP1L5Q96NT1 182 aaPredicted RBP7□□□□□ -1.29
ZEB1-209ENST00000542879 CDK12Q9NYV4 1490 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 CYP2E1P05181 493 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 NUTM2DQ5VT03 806 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 GGT6Q6P531 493 aa6.99□□□□□ -1.29
ZEB1-209ENST00000542879 RBM42Q9BTD8 480 aaKnown RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 TERF2IPQ9NYB0 399 aa6.99□□□□□ -1.29
ZEB1-209ENST00000542879 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 PDE4CQ08493 712 aa6.99□□□□□ -1.29
ZEB1-209ENST00000542879 BCL11BQ9C0K0 894 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-209ENST00000542879 RRP9O43818 475 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms