RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
NPIPB4-216ENST00000542338 ATRNO75882 1429 aa12.57□□□□□ -0.4
NPIPB4-216ENST00000542338 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
NPIPB4-216ENST00000542338 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
NPIPB4-216ENST00000542338 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
NPIPB4-216ENST00000542338 GCP02774 474 aa12.56□□□□□ -0.4
NPIPB4-216ENST00000542338 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
NPIPB4-216ENST00000542338 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
NPIPB4-216ENST00000542338 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
NPIPB4-216ENST00000542338 INSRP06213 1382 aa12.56□□□□□ -0.4
NPIPB4-216ENST00000542338 AMPHP49418 695 aa12.55□□□□□ -0.4
NPIPB4-216ENST00000542338 USP19O94966 1318 aa12.55□□□□□ -0.4
NPIPB4-216ENST00000542338 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
NPIPB4-216ENST00000542338 SLIT2O94813 1529 aa12.53□□□□□ -0.4
NPIPB4-216ENST00000542338 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
NPIPB4-216ENST00000542338 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
NPIPB4-216ENST00000542338 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
NPIPB4-216ENST00000542338 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
NPIPB4-216ENST00000542338 SOX12O15370 315 aa12.52□□□□□ -0.41
NPIPB4-216ENST00000542338 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
NPIPB4-216ENST00000542338 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
NPIPB4-216ENST00000542338 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
NPIPB4-216ENST00000542338 FLT4P35916 1363 aa12.52□□□□□ -0.41
NPIPB4-216ENST00000542338 MAP3K19Q56UN5 1328 aa12.51□□□□□ -0.41
NPIPB4-216ENST00000542338 SLIT3O75094 1523 aa12.51□□□□□ -0.41
NPIPB4-216ENST00000542338 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
NPIPB4-216ENST00000542338 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
NPIPB4-216ENST00000542338 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
NPIPB4-216ENST00000542338 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
NPIPB4-216ENST00000542338 IP6K1Q92551 441 aa12.5□□□□□ -0.41
NPIPB4-216ENST00000542338 PHRF1Q9P1Y6 1649 aaKnown RBP12.5□□□□□ -0.41
NPIPB4-216ENST00000542338 GLI3P10071 1580 aa12.49□□□□□ -0.41
NPIPB4-216ENST00000542338 FBLN1P23142 703 aa12.49□□□□□ -0.41
NPIPB4-216ENST00000542338 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
NPIPB4-216ENST00000542338 CPDO75976 1380 aa12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 NEFMP07197 916 aa12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 HOXC9P31274 260 aa12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
NPIPB4-216ENST00000542338 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 IL13P35225 146 aa12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 HSP90AB2PQ58FF8 381 aa12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 NFAT5O94916 1531 aa12.47□□□□□ -0.41
NPIPB4-216ENST00000542338 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
NPIPB4-216ENST00000542338 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.41
NPIPB4-216ENST00000542338 FCHSD2O94868 740 aa12.46□□□□□ -0.41
NPIPB4-216ENST00000542338 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.41
NPIPB4-216ENST00000542338 VPS72Q15906 364 aa12.46□□□□□ -0.41
NPIPB4-216ENST00000542338 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 ABCC6O95255 1503 aa12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
NPIPB4-216ENST00000542338 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
NPIPB4-216ENST00000542338 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
NPIPB4-216ENST00000542338 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
NPIPB4-216ENST00000542338 EP400Q96L91 3159 aa12.43□□□□□ -0.42
NPIPB4-216ENST00000542338 HNRNPUQ00839 825 aaKnown RBP eCLIP12.43□□□□□ -0.42
NPIPB4-216ENST00000542338 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
NPIPB4-216ENST00000542338 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
NPIPB4-216ENST00000542338 FAM83GA6ND36 823 aa12.42□□□□□ -0.42
NPIPB4-216ENST00000542338 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
NPIPB4-216ENST00000542338 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
NPIPB4-216ENST00000542338 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
NPIPB4-216ENST00000542338 A0A0G2JS52 829 aa12.4□□□□□ -0.42
NPIPB4-216ENST00000542338 MYT1Q01538 1121 aa12.4□□□□□ -0.42
NPIPB4-216ENST00000542338 LTV1Q96GA3 475 aaPredicted RBP12.4□□□□□ -0.42
NPIPB4-216ENST00000542338 ERBB3P21860 1342 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 LTN1O94822 1766 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 EVA1CP58658 441 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 EYA1Q99502 592 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 PEAK1Q9H792 1746 aa12.39□□□□□ -0.43
NPIPB4-216ENST00000542338 ZBED9Q6R2W3 1325 aa12.38□□□□□ -0.43
NPIPB4-216ENST00000542338 PRKAR2BP31323 418 aa12.38□□□□□ -0.43
NPIPB4-216ENST00000542338 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
NPIPB4-216ENST00000542338 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
NPIPB4-216ENST00000542338 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
NPIPB4-216ENST00000542338 APAF1O14727 1248 aa12.37□□□□□ -0.43
NPIPB4-216ENST00000542338 HMOX1P09601 288 aa12.37□□□□□ -0.43
NPIPB4-216ENST00000542338 CCDC146Q8IYE0 955 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms