RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 PNNQ9H307 717 aaKnown RBP11.57□□□□□ -0.56
THBS3-211ENST00000541990 TTC21BQ7Z4L5 1316 aa11.57□□□□□ -0.56
THBS3-211ENST00000541990 ATP7BP35670 1465 aa11.57□□□□□ -0.56
THBS3-211ENST00000541990 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
THBS3-211ENST00000541990 COG3Q96JB2 828 aa11.57□□□□□ -0.56
THBS3-211ENST00000541990 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
THBS3-211ENST00000541990 NLRP6P59044 892 aa11.56□□□□□ -0.56
THBS3-211ENST00000541990 TECPR2O15040 1411 aa11.56□□□□□ -0.56
THBS3-211ENST00000541990 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
THBS3-211ENST00000541990 PDE3AQ14432 1141 aa11.56□□□□□ -0.56
THBS3-211ENST00000541990 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
THBS3-211ENST00000541990 CLCN1P35523 988 aa11.55□□□□□ -0.56
THBS3-211ENST00000541990 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
THBS3-211ENST00000541990 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
THBS3-211ENST00000541990 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
THBS3-211ENST00000541990 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
THBS3-211ENST00000541990 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
THBS3-211ENST00000541990 TRAK2O60296 914 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
THBS3-211ENST00000541990 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
THBS3-211ENST00000541990 PSME1Q06323 249 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 CABLES1Q8TDN4 633 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
THBS3-211ENST00000541990 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
THBS3-211ENST00000541990 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
THBS3-211ENST00000541990 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
THBS3-211ENST00000541990 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
THBS3-211ENST00000541990 TMEM94Q12767 1356 aa11.53□□□□□ -0.56
THBS3-211ENST00000541990 NPC1L1Q9UHC9 1359 aa11.53□□□□□ -0.56
THBS3-211ENST00000541990 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
THBS3-211ENST00000541990 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
THBS3-211ENST00000541990 RGPD8O14715 1765 aaPredicted RBP11.52□□□□□ -0.57
THBS3-211ENST00000541990 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
THBS3-211ENST00000541990 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
THBS3-211ENST00000541990 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
THBS3-211ENST00000541990 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
THBS3-211ENST00000541990 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
THBS3-211ENST00000541990 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
THBS3-211ENST00000541990 GAS2L3Q86XJ1 694 aa11.5□□□□□ -0.57
THBS3-211ENST00000541990 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
THBS3-211ENST00000541990 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
THBS3-211ENST00000541990 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
THBS3-211ENST00000541990 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 C22orf23Q9BZE7 217 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 GRPEL1Q9HAV7 217 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
THBS3-211ENST00000541990 USP6P35125 1406 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
THBS3-211ENST00000541990 PTCH1Q13635 1447 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
THBS3-211ENST00000541990 CHMP5Q9NZZ3 219 aa11.49□□□□□ -0.57
THBS3-211ENST00000541990 ATF3P18847 181 aa11.48□□□□□ -0.57
THBS3-211ENST00000541990 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
THBS3-211ENST00000541990 ESPNB1AK53 854 aa11.48□□□□□ -0.57
THBS3-211ENST00000541990 AMPHP49418 695 aa11.48□□□□□ -0.57
THBS3-211ENST00000541990 SULT6B1Q6IMI4 303 aa11.48□□□□□ -0.57
THBS3-211ENST00000541990 MRE11P49959 708 aa11.47□□□□□ -0.57
THBS3-211ENST00000541990 EIF4A2Q14240 407 aaKnown RBP11.47□□□□□ -0.57
THBS3-211ENST00000541990 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
THBS3-211ENST00000541990 C19orf44Q9H6X5 657 aa11.47□□□□□ -0.57
THBS3-211ENST00000541990 USP32Q8NFA0 1604 aa11.47□□□□□ -0.57
THBS3-211ENST00000541990 ELL2O00472 640 aaPredicted RBP11.46□□□□□ -0.57
THBS3-211ENST00000541990 IL13P35225 146 aa11.46□□□□□ -0.57
THBS3-211ENST00000541990 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.57
THBS3-211ENST00000541990 RIPK4P57078 832 aa11.46□□□□□ -0.57
THBS3-211ENST00000541990 GLIPR1L2Q4G1C9 344 aa11.46□□□□□ -0.57
THBS3-211ENST00000541990 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
THBS3-211ENST00000541990 RRP9O43818 475 aaKnown RBP11.46□□□□□ -0.58
THBS3-211ENST00000541990 KRT28Q7Z3Y7 464 aa11.46□□□□□ -0.58
THBS3-211ENST00000541990 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.58
THBS3-211ENST00000541990 LRRC59Q96AG4 307 aaKnown RBP11.45□□□□□ -0.58
THBS3-211ENST00000541990 STRCQ7RTU9 1775 aa11.45□□□□□ -0.58
THBS3-211ENST00000541990 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
THBS3-211ENST00000541990 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
THBS3-211ENST00000541990 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
THBS3-211ENST00000541990 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
THBS3-211ENST00000541990 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
THBS3-211ENST00000541990 XRN1Q8IZH2 1706 aaKnown RBP11.44□□□□□ -0.58
THBS3-211ENST00000541990 NSD2O96028 1365 aa11.44□□□□□ -0.58
THBS3-211ENST00000541990 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
THBS3-211ENST00000541990 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
THBS3-211ENST00000541990 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
THBS3-211ENST00000541990 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 PIK3R4Q99570 1358 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 CD2BP2O95400 341 aaKnown RBP11.43□□□□□ -0.58
THBS3-211ENST00000541990 DDIT3P35638 169 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 NALCNQ8IZF0 1738 aa11.43□□□□□ -0.58
THBS3-211ENST00000541990 HSCBQ8IWL3 235 aa11.42□□□□□ -0.58
THBS3-211ENST00000541990 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
THBS3-211ENST00000541990 ZNF142P52746 1687 aaPredicted RBP11.42□□□□□ -0.58
THBS3-211ENST00000541990 MCM10Q7L590 875 aa11.42□□□□□ -0.58
THBS3-211ENST00000541990 AXIN2Q9Y2T1 843 aa11.42□□□□□ -0.58
THBS3-211ENST00000541990 CHD2O14647 1828 aaKnown RBP11.42□□□□□ -0.58
THBS3-211ENST00000541990 EYA1Q99502 592 aa11.42□□□□□ -0.58
THBS3-211ENST00000541990 PHF23Q9BUL5 403 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms