RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 DISP1Q96F81 1524 aa8.69□□□□□ -1.02
CPSF7-220ENST00000541963 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-220ENST00000541963 NUDT12Q9BQG2 462 aa8.68□□□□□ -1.02
CPSF7-220ENST00000541963 ZC3H4Q9UPT8 1303 aaKnown RBP8.68□□□□□ -1.02
CPSF7-220ENST00000541963 UACAQ9BZF9 1416 aa8.68□□□□□ -1.02
CPSF7-220ENST00000541963 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
CPSF7-220ENST00000541963 MMP16P51512 607 aa8.67□□□□□ -1.02
CPSF7-220ENST00000541963 FAM69CQ0P6D2 419 aa8.67□□□□□ -1.02
CPSF7-220ENST00000541963 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
CPSF7-220ENST00000541963 KIAA0556O60303 1618 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 ADCY10Q96PN6 1610 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-220ENST00000541963 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
CPSF7-220ENST00000541963 UHRF1BP1LA0JNW5 1464 aa8.65□□□□□ -1.02
CPSF7-220ENST00000541963 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
CPSF7-220ENST00000541963 ZBBXA8MT70 800 aa8.65□□□□□ -1.02
CPSF7-220ENST00000541963 NR1H3Q13133 447 aa8.65□□□□□ -1.02
CPSF7-220ENST00000541963 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.023e-7■■■■□ 21.6
CPSF7-220ENST00000541963 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 RANGAP1P46060 587 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-220ENST00000541963 PTK2Q05397 1052 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 NBPF14Q5TI25 921 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 KIF21BO75037 1637 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
CPSF7-220ENST00000541963 TLL1O43897 1013 aa8.63□□□□□ -1.03
CPSF7-220ENST00000541963 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
CPSF7-220ENST00000541963 ABCC10Q5T3U5 1492 aa8.63□□□□□ -1.03
CPSF7-220ENST00000541963 GPR37L1O60883 481 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-220ENST00000541963 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 ALG2Q9H553 416 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 PRDM9Q9NQV7 894 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
CPSF7-220ENST00000541963 PDXDC2PQ6P474 469 aa8.61□□□□□ -1.03
CPSF7-220ENST00000541963 KDM5BQ9UGL1 1544 aa8.6□□□□□ -1.03
CPSF7-220ENST00000541963 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
CPSF7-220ENST00000541963 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-220ENST00000541963 PCDH10Q9P2E7 1040 aa8.6□□□□□ -1.03
CPSF7-220ENST00000541963 ASXL2Q76L83 1435 aa8.6□□□□□ -1.03
CPSF7-220ENST00000541963 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
CPSF7-220ENST00000541963 GGCXP38435 758 aa8.59□□□□□ -1.03
CPSF7-220ENST00000541963 KCNC4Q03721 635 aa8.59□□□□□ -1.03
CPSF7-220ENST00000541963 KIF13AQ9H1H9 1805 aa8.59□□□□□ -1.03
CPSF7-220ENST00000541963 PDE4CQ08493 712 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 ZBTB33Q86T24 672 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 ADAMTS19Q8TE59 1207 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 ARHGAP9Q9BRR9 750 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
CPSF7-220ENST00000541963 ABCA8O94911 1581 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 DIP2BQ9P265 1576 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 S1PR4O95977 384 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 RFX1P22670 979 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-220ENST00000541963 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
CPSF7-220ENST00000541963 ZCCHC11Q5TAX3 1644 aaKnown RBP8.57□□□□□ -1.04
CPSF7-220ENST00000541963 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-220ENST00000541963 AGERQ15109 404 aa8.56□□□□□ -1.04
CPSF7-220ENST00000541963 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
CPSF7-220ENST00000541963 PBXIP1Q96AQ6 731 aa8.56□□□□□ -1.04
CPSF7-220ENST00000541963 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
CPSF7-220ENST00000541963 PCDHB9Q9Y5E1 797 aa8.56□□□□□ -1.04
CPSF7-220ENST00000541963 GLI2P10070 1586 aa8.56□□□□□ -1.04
CPSF7-220ENST00000541963 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-220ENST00000541963 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-220ENST00000541963 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
CPSF7-220ENST00000541963 FHOD3Q2V2M9 1422 aa8.54□□□□□ -1.04
CPSF7-220ENST00000541963 WDR7Q9Y4E6 1490 aa8.54□□□□□ -1.04
CPSF7-220ENST00000541963 PLEKHD1A6NEE1 506 aa8.54□□□□□ -1.04
CPSF7-220ENST00000541963 SLFNL1Q499Z3 407 aa8.54□□□□□ -1.04
CPSF7-220ENST00000541963 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-220ENST00000541963 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-220ENST00000541963 RAPGEF6Q8TEU7 1601 aa8.54□□□□□ -1.04
CPSF7-220ENST00000541963 EPRSP07814 1512 aaKnown RBP8.54□□□□□ -1.04
CPSF7-220ENST00000541963 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
CPSF7-220ENST00000541963 ATP10BO94823 1461 aa8.53□□□□□ -1.04
CPSF7-220ENST00000541963 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
CPSF7-220ENST00000541963 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
CPSF7-220ENST00000541963 ATP9BO43861 1147 aa8.52□□□□□ -1.05
CPSF7-220ENST00000541963 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
CPSF7-220ENST00000541963 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
CPSF7-220ENST00000541963 BAP1Q92560 729 aa8.52□□□□□ -1.05
CPSF7-220ENST00000541963 TEX14Q8IWB6 1497 aa8.51□□□□□ -1.05
CPSF7-220ENST00000541963 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
CPSF7-220ENST00000541963 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
CPSF7-220ENST00000541963 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
CPSF7-220ENST00000541963 CDK11AQ9UQ88 783 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-220ENST00000541963 ITGBL1O95965 494 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-220ENST00000541963 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
CPSF7-220ENST00000541963 SKIP12755 728 aa8.5□□□□□ -1.05
CPSF7-220ENST00000541963 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
CPSF7-220ENST00000541963 CD109Q6YHK3 1445 aa8.5□□□□□ -1.05
CPSF7-220ENST00000541963 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms