RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 PEAK1Q9H792 1746 aa10.89□□□□□ -0.67
NECAP1-205ENST00000541948 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
NECAP1-205ENST00000541948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
NECAP1-205ENST00000541948 OVOS2A0A0J9YW53 1432 aa10.89□□□□□ -0.67
NECAP1-205ENST00000541948 OVOS2Q6IE36 1432 aa10.89□□□□□ -0.67
NECAP1-205ENST00000541948 ZBTB7CA1YPR0 619 aa10.88□□□□□ -0.67
NECAP1-205ENST00000541948 SOX12O15370 315 aa10.88□□□□□ -0.67
NECAP1-205ENST00000541948 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
NECAP1-205ENST00000541948 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
NECAP1-205ENST00000541948 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
NECAP1-205ENST00000541948 CRB1P82279 1406 aa10.87□□□□□ -0.67
NECAP1-205ENST00000541948 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
NECAP1-205ENST00000541948 FBLN1P23142 703 aa10.87□□□□□ -0.67
NECAP1-205ENST00000541948 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
NECAP1-205ENST00000541948 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
NECAP1-205ENST00000541948 A0A0G2JS52 829 aa10.86□□□□□ -0.67
NECAP1-205ENST00000541948 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
NECAP1-205ENST00000541948 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
NECAP1-205ENST00000541948 MYT1Q01538 1121 aa10.86□□□□□ -0.67
NECAP1-205ENST00000541948 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
NECAP1-205ENST00000541948 EVA1CP58658 441 aa10.85□□□□□ -0.67
NECAP1-205ENST00000541948 TCP11L2Q8N4U5 519 aa10.85□□□□□ -0.67
NECAP1-205ENST00000541948 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
NECAP1-205ENST00000541948 RGPD2P0DJD1 1756 aa10.85□□□□□ -0.67
NECAP1-205ENST00000541948 POTEHQ6S545 545 aa10.84□□□□□ -0.67
NECAP1-205ENST00000541948 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
NECAP1-205ENST00000541948 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
NECAP1-205ENST00000541948 ABCC6O95255 1503 aa10.84□□□□□ -0.67
NECAP1-205ENST00000541948 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
NECAP1-205ENST00000541948 ANKRD36BQ8N2N9 1353 aa10.83□□□□□ -0.68
NECAP1-205ENST00000541948 KCNH5Q8NCM2 988 aa10.83□□□□□ -0.68
NECAP1-205ENST00000541948 CARD14Q9BXL6 1004 aa10.83□□□□□ -0.68
NECAP1-205ENST00000541948 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.68
NECAP1-205ENST00000541948 RREB1Q92766 1687 aa10.82□□□□□ -0.68
NECAP1-205ENST00000541948 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
NECAP1-205ENST00000541948 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
NECAP1-205ENST00000541948 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
NECAP1-205ENST00000541948 NINLQ9Y2I6 1382 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 FYB1O15117 783 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 TRIM37O94972 964 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 BAG6P46379 1132 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 TMF1P82094 1093 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 TERF2IPQ9NYB0 399 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 NUP188Q5SRE5 1749 aa10.81□□□□□ -0.68
NECAP1-205ENST00000541948 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-205ENST00000541948 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-205ENST00000541948 THRAP3Q9Y2W1 955 aaKnown RBP10.8□□□□□ -0.68
NECAP1-205ENST00000541948 SHANK3Q9BYB0 1731 aa10.8□□□□□ -0.68
NECAP1-205ENST00000541948 ERBB3P21860 1342 aa10.8□□□□□ -0.68
NECAP1-205ENST00000541948 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
NECAP1-205ENST00000541948 EZH2Q15910 746 aaKnown RBP10.79□□□□□ -0.68
NECAP1-205ENST00000541948 CAMKK2Q96RR4 588 aa10.79□□□□□ -0.68
NECAP1-205ENST00000541948 GGNBP2Q9H3C7 697 aa10.79□□□□□ -0.68
NECAP1-205ENST00000541948 MAP3K19Q56UN5 1328 aa10.79□□□□□ -0.68
NECAP1-205ENST00000541948 PARD3Q8TEW0 1356 aa10.78□□□□□ -0.68
NECAP1-205ENST00000541948 HSPA5P11021 654 aaKnown RBP10.78□□□□□ -0.68
NECAP1-205ENST00000541948 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
NECAP1-205ENST00000541948 CARD10Q9BWT7 1032 aa10.78□□□□□ -0.68
NECAP1-205ENST00000541948 PDE3BQ13370 1112 aa10.77□□□□□ -0.69
NECAP1-205ENST00000541948 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.69
NECAP1-205ENST00000541948 ANKRD26Q9UPS8 1709 aa10.77□□□□□ -0.69
NECAP1-205ENST00000541948 NSD3Q9BZ95 1437 aa10.76□□□□□ -0.69
NECAP1-205ENST00000541948 PSDA5PKW4 1024 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-205ENST00000541948 HOXC9P31274 260 aa10.76□□□□□ -0.69
NECAP1-205ENST00000541948 RRS1Q15050 365 aaKnown RBP10.76□□□□□ -0.69
NECAP1-205ENST00000541948 DDB1Q16531 1140 aa10.76□□□□□ -0.69
NECAP1-205ENST00000541948 IP6K1Q92551 441 aa10.76□□□□□ -0.69
NECAP1-205ENST00000541948 LRP5O75197 1615 aa10.76□□□□□ -0.69
NECAP1-205ENST00000541948 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 TNS2Q63HR2 1409 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 CSB-PGBD3P0DP91 1061 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 KCNA4P22459 653 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 RGPD3A6NKT7 1758 aaPredicted RBP10.75□□□□□ -0.69
NECAP1-205ENST00000541948 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 BCL9O00512 1426 aa10.75□□□□□ -0.69
NECAP1-205ENST00000541948 MEGF6O75095 1541 aa10.74□□□□□ -0.69
NECAP1-205ENST00000541948 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
NECAP1-205ENST00000541948 APBA3O96018 575 aa10.74□□□□□ -0.69
NECAP1-205ENST00000541948 PROM2Q8N271 834 aa10.74□□□□□ -0.69
NECAP1-205ENST00000541948 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
NECAP1-205ENST00000541948 COG3Q96JB2 828 aa10.74□□□□□ -0.69
NECAP1-205ENST00000541948 KCNQ2O43526 872 aa10.73□□□□□ -0.69
NECAP1-205ENST00000541948 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
NECAP1-205ENST00000541948 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
NECAP1-205ENST00000541948 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
NECAP1-205ENST00000541948 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
NECAP1-205ENST00000541948 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
NECAP1-205ENST00000541948 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
NECAP1-205ENST00000541948 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
NECAP1-205ENST00000541948 BTAF1O14981 1849 aa10.71□□□□□ -0.69
NECAP1-205ENST00000541948 IL2RBP14784 551 aa10.71□□□□□ -0.69
NECAP1-205ENST00000541948 R3HDM1Q15032 1099 aaKnown RBP10.71□□□□□ -0.69
NECAP1-205ENST00000541948 USHBP1Q8N6Y0 703 aa10.71□□□□□ -0.69
NECAP1-205ENST00000541948 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
NECAP1-205ENST00000541948 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
NECAP1-205ENST00000541948 RTL1A6NKG5 1358 aa10.7□□□□□ -0.7
NECAP1-205ENST00000541948 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
NECAP1-205ENST00000541948 PAPPAQ13219 1627 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms