RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 HMOX1P09601 288 aa23.25■■□□□ 1.31
RAB6A-208ENST00000541795 NEUROD2Q15784 382 aa23.25■■□□□ 1.31
RAB6A-208ENST00000541795 PHRF1Q9P1Y6 1649 aaKnown RBP23.25■■□□□ 1.31
RAB6A-208ENST00000541795 HOXC9P31274 260 aa23.24■■□□□ 1.31
RAB6A-208ENST00000541795 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
RAB6A-208ENST00000541795 GOLGA2Q08379 1002 aa23.24■■□□□ 1.31
RAB6A-208ENST00000541795 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
RAB6A-208ENST00000541795 SUPT16HQ9Y5B9 1047 aaKnown RBP23.23■■□□□ 1.31
RAB6A-208ENST00000541795 GCP02774 474 aa23.22■■□□□ 1.31
RAB6A-208ENST00000541795 NEFMP07197 916 aa23.22■■□□□ 1.31
RAB6A-208ENST00000541795 WWC1Q8IX03 1113 aa23.22■■□□□ 1.31
RAB6A-208ENST00000541795 MED1Q15648 1581 aaPredicted RBP23.22■■□□□ 1.31
RAB6A-208ENST00000541795 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
RAB6A-208ENST00000541795 NHSL1Q5SYE7 1610 aa23.21■■□□□ 1.31
RAB6A-208ENST00000541795 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
RAB6A-208ENST00000541795 TMPOP42166 694 aaKnown RBP23.21■■□□□ 1.31
RAB6A-208ENST00000541795 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
RAB6A-208ENST00000541795 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
RAB6A-208ENST00000541795 ARHGEF10O15013 1369 aa23.2■■□□□ 1.3
RAB6A-208ENST00000541795 SLFN5Q08AF3 891 aa23.18■■□□□ 1.3
RAB6A-208ENST00000541795 SULT6B1Q6IMI4 303 aa23.18■■□□□ 1.3
RAB6A-208ENST00000541795 IP6K1Q92551 441 aa23.18■■□□□ 1.3
RAB6A-208ENST00000541795 CRYBG1Q9Y4K1 1723 aa23.18■■□□□ 1.3
RAB6A-208ENST00000541795 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
RAB6A-208ENST00000541795 NEFLP07196 543 aa23.17■■□□□ 1.3
RAB6A-208ENST00000541795 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
RAB6A-208ENST00000541795 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
RAB6A-208ENST00000541795 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
RAB6A-208ENST00000541795 E9PSI1 815 aa23.16■■□□□ 1.3
RAB6A-208ENST00000541795 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
RAB6A-208ENST00000541795 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
RAB6A-208ENST00000541795 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
RAB6A-208ENST00000541795 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
RAB6A-208ENST00000541795 RIPK4P57078 832 aa23.15■■□□□ 1.3
RAB6A-208ENST00000541795 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
RAB6A-208ENST00000541795 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.29
RAB6A-208ENST00000541795 EYA1Q99502 592 aa23.14■■□□□ 1.29
RAB6A-208ENST00000541795 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
RAB6A-208ENST00000541795 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
RAB6A-208ENST00000541795 KDRP35968 1356 aa23.13■■□□□ 1.29
RAB6A-208ENST00000541795 DLG5Q8TDM6 1919 aa23.13■■□□□ 1.29
RAB6A-208ENST00000541795 LTV1Q96GA3 475 aaPredicted RBP23.12■■□□□ 1.29
RAB6A-208ENST00000541795 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
RAB6A-208ENST00000541795 RCAN3Q9UKA8 241 aa23.11■■□□□ 1.29
RAB6A-208ENST00000541795 FKBP8Q14318 412 aa23.1■■□□□ 1.29
RAB6A-208ENST00000541795 CABLES1Q8TDN4 633 aa23.1■■□□□ 1.29
RAB6A-208ENST00000541795 RGPD5Q99666 1765 aa23.09■■□□□ 1.29
RAB6A-208ENST00000541795 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
RAB6A-208ENST00000541795 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
RAB6A-208ENST00000541795 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
RAB6A-208ENST00000541795 ABCA3Q99758 1704 aa23.07■■□□□ 1.28
RAB6A-208ENST00000541795 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
RAB6A-208ENST00000541795 AHDC1Q5TGY3 1603 aaPredicted RBP23.06■■□□□ 1.28
RAB6A-208ENST00000541795 ABCC6O95255 1503 aa23.06■■□□□ 1.28
RAB6A-208ENST00000541795 COL18A1P39060 1754 aa23.06■■□□□ 1.28
RAB6A-208ENST00000541795 LMOD3Q0VAK6 560 aa23.05■■□□□ 1.28
RAB6A-208ENST00000541795 IL16Q14005 1332 aa23.05■■□□□ 1.28
RAB6A-208ENST00000541795 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
RAB6A-208ENST00000541795 CPDO75976 1380 aa23.04■■□□□ 1.28
RAB6A-208ENST00000541795 ANKRD24Q8TF21 1146 aa23.03■■□□□ 1.28
RAB6A-208ENST00000541795 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
RAB6A-208ENST00000541795 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
RAB6A-208ENST00000541795 IRX6P78412 446 aaPredicted RBP23.02■■□□□ 1.28
RAB6A-208ENST00000541795 NBPF6Q5VWK0 638 aa23.02■■□□□ 1.28
RAB6A-208ENST00000541795 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
RAB6A-208ENST00000541795 NBPF4Q96M43 638 aa23.02■■□□□ 1.28
RAB6A-208ENST00000541795 KIAA0232Q92628 1395 aa23.02■■□□□ 1.28
RAB6A-208ENST00000541795 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
RAB6A-208ENST00000541795 ERBB3P21860 1342 aa23■■□□□ 1.27
RAB6A-208ENST00000541795 RRP1P56182 461 aaKnown RBP22.99■■□□□ 1.27
RAB6A-208ENST00000541795 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
RAB6A-208ENST00000541795 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
RAB6A-208ENST00000541795 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
RAB6A-208ENST00000541795 FAM208AQ9UK61 1670 aaKnown RBP22.98■■□□□ 1.27
RAB6A-208ENST00000541795 FANCIQ9NVI1 1328 aa22.98■■□□□ 1.27
RAB6A-208ENST00000541795 CHRNA2Q15822 529 aa22.98■■□□□ 1.27
RAB6A-208ENST00000541795 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
RAB6A-208ENST00000541795 GAS2L2Q8NHY3 880 aa22.98■■□□□ 1.27
RAB6A-208ENST00000541795 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
RAB6A-208ENST00000541795 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
RAB6A-208ENST00000541795 FAM83GA6ND36 823 aa22.96■■□□□ 1.27
RAB6A-208ENST00000541795 TOM1O60784 492 aa22.96■■□□□ 1.27
RAB6A-208ENST00000541795 PHLPP1O60346 1717 aa22.96■■□□□ 1.27
RAB6A-208ENST00000541795 TSR2Q969E8 191 aaKnown RBP22.96■■□□□ 1.27
RAB6A-208ENST00000541795 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
RAB6A-208ENST00000541795 COL22A1Q8NFW1 1626 aaPredicted RBP22.94■■□□□ 1.26
RAB6A-208ENST00000541795 DCTN1Q14203 1278 aa22.94■■□□□ 1.26
RAB6A-208ENST00000541795 IFT57Q9NWB7 429 aa22.93■■□□□ 1.26
RAB6A-208ENST00000541795 COL16A1Q07092 1604 aaPredicted RBP22.92■■□□□ 1.26
RAB6A-208ENST00000541795 LAS1LQ9Y4W2 734 aaKnown RBP22.92■■□□□ 1.26
RAB6A-208ENST00000541795 GNAI1P63096 354 aa22.92■■□□□ 1.26
RAB6A-208ENST00000541795 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
RAB6A-208ENST00000541795 PIP4K2BP78356 416 aa22.91■■□□□ 1.26
RAB6A-208ENST00000541795 CSB-PGBD3P0DP91 1061 aa22.9■■□□□ 1.26
RAB6A-208ENST00000541795 MCM10Q7L590 875 aa22.9■■□□□ 1.26
RAB6A-208ENST00000541795 RTF1Q92541 710 aaKnown RBP22.9■■□□□ 1.26
RAB6A-208ENST00000541795 NLRP2Q9NX02 1062 aa22.89■■□□□ 1.26
RAB6A-208ENST00000541795 MAP3K5Q99683 1374 aa22.89■■□□□ 1.25
RAB6A-208ENST00000541795 CT47B1P0C2W7 299 aaPredicted RBP22.89■■□□□ 1.25
RAB6A-208ENST00000541795 ZNF853P0CG23 659 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms