RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 TEX35Q5T0J7 233 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 SPTY2D1Q68D10 685 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-218ENST00000541615 HS6ST3Q8IZP7 471 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 TXLNBQ8N3L3 684 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 ZNF513Q8N8E2 541 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-218ENST00000541615 SGSM3Q96HU1 749 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 SUFUQ9UMX1 484 aa6.29□□□□□ -1.4
SNHG1-218ENST00000541615 MORC2Q9Y6X9 1032 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-218ENST00000541615 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.42e-9■■■■■ 30
SNHG1-218ENST00000541615 USP8P40818 1118 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 GPS2Q13227 327 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 UVSSAQ2YD98 709 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 JAKMIP3Q5VZ66 844 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 CENPQQ7L2Z9 268 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-218ENST00000541615 SUGP1Q8IWZ8 645 aaKnown RBP6.28□□□□□ -1.4
SNHG1-218ENST00000541615 KRT222Q8N1A0 295 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 SDR16C5Q8N3Y7 309 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 ANKRD7Q92527 254 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 CEP89Q96ST8 783 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 LARP6Q9BRS8 491 aaKnown RBP6.28□□□□□ -1.4
SNHG1-218ENST00000541615 HIRIP3Q9BW71 556 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-218ENST00000541615 ZMYM3Q14202 1370 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 CEP164Q9UPV0 1460 aa6.28□□□□□ -1.4
SNHG1-218ENST00000541615 KIAA1107Q9UPP5 1409 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 ARHGAP33O14559 1287 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 PDE3BQ13370 1112 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 FAM9BQ8IZU0 186 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-218ENST00000541615 PDLIM2Q96JY6 352 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 GPHNQ9NQX3 736 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-218ENST00000541615 AXIN2Q9Y2T1 843 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 JRKLQ9Y4A0 524 aa6.27□□□□□ -1.41
SNHG1-218ENST00000541615 V9GYY5 206 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-218ENST00000541615 ANKRD33BA6NCL7 494 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 IPO8O15397 1037 aaKnown RBP6.26□□□□□ -1.41
SNHG1-218ENST00000541615 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 CD151P48509 253 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 ADGRD1Q6QNK2 874 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 ARMCX6Q7L4S7 300 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 FMNL3Q8IVF7 1028 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 ANKRD20A12PQ8NF67 263 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 CEP126Q9P2H0 1117 aa6.26□□□□□ -1.41
SNHG1-218ENST00000541615 DDX41Q9UJV9 622 aaKnown RBP6.26□□□□□ -1.41
SNHG1-218ENST00000541615 DDX49Q9Y6V7 483 aaKnown RBP6.26□□□□□ -1.41
SNHG1-218ENST00000541615 CCDC189A1A4V9 331 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 ANKRD18BA2A2Z9 1011 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 TK2O00142 265 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 MAP2K2P36507 400 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 RRP1P56182 461 aaKnown RBP6.25□□□□□ -1.41
SNHG1-218ENST00000541615 TRAF1Q13077 416 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 ZC3H12AQ5D1E8 599 aaKnown RBP6.25□□□□□ -1.41
SNHG1-218ENST00000541615 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 CAVIN1Q6NZI2 390 aaKnown RBP6.25□□□□□ -1.41
SNHG1-218ENST00000541615 FAM184AQ8NB25 1140 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 KLHL23Q8NBE8 558 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 CALR3Q96L12 384 aaKnown RBP6.25□□□□□ -1.41
SNHG1-218ENST00000541615 KANK1Q14678 1352 aa6.25□□□□□ -1.41
SNHG1-218ENST00000541615 NPC1L1Q9UHC9 1359 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 CYP2C19P33261 490 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 SLC4A3P48751 1232 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 RAD51AP2Q09MP3 1159 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 TTC31Q49AM3 519 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-218ENST00000541615 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 PLPP6Q8IY26 295 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 CCDC97Q96F63 343 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-218ENST00000541615 DNAJC5Q9H3Z4 198 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 HCSTQ9UBK5 93 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 SMC3Q9UQE7 1217 aa6.24□□□□□ -1.41
SNHG1-218ENST00000541615 RAD54L2Q9Y4B4 1467 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 UNC13AQ9UPW8 1703 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 PES1O00541 588 aaKnown RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 CTIFO43310 598 aaKnown RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 HTATSF1O43719 755 aaKnown RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 TBC1D12O60347 775 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 PEX19P40855 299 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 MAGEA8P43361 318 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 ZNF445P59923 1031 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 NUCB2P80303 420 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 BIRC2Q13490 618 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 PDCD2Q16342 344 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 ZSCAN26Q16670 478 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 MCTP2Q6DN12 878 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 STAG1Q8WVM7 1258 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 PPM1EQ8WY54 764 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 ARHGEF1Q92888 912 aaKnown RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 NOL10Q9BSC4 688 aaKnown RBP6.23□□□□□ -1.41
SNHG1-218ENST00000541615 UBA5Q9GZZ9 404 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 FAM107BQ9H098 131 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
SNHG1-218ENST00000541615 IGF1RP08069 1367 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 IVLP07476 585 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 TPM1P09493 284 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 TPM4P67936 248 aa6.22□□□□□ -1.41
SNHG1-218ENST00000541615 XPCQ01831 940 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms