RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
THBS3-210ENST00000541576 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
THBS3-210ENST00000541576 EIF4A2Q14240 407 aaKnown RBP11.41□□□□□ -0.58
THBS3-210ENST00000541576 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
THBS3-210ENST00000541576 HMOX1P09601 288 aa11.4□□□□□ -0.58
THBS3-210ENST00000541576 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
THBS3-210ENST00000541576 NFAT5O94916 1531 aa11.4□□□□□ -0.58
THBS3-210ENST00000541576 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 PXDNQ92626 1479 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 USP19O94966 1318 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 NEFMP07197 916 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
THBS3-210ENST00000541576 SLIT3O75094 1523 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 RTL1A6NKG5 1358 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 GCP02774 474 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 HOXC9P31274 260 aa11.39□□□□□ -0.59
THBS3-210ENST00000541576 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
THBS3-210ENST00000541576 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
THBS3-210ENST00000541576 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
THBS3-210ENST00000541576 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
THBS3-210ENST00000541576 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
THBS3-210ENST00000541576 LTN1O94822 1766 aa11.38□□□□□ -0.59
THBS3-210ENST00000541576 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
THBS3-210ENST00000541576 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
THBS3-210ENST00000541576 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
THBS3-210ENST00000541576 SLFN5Q08AF3 891 aa11.37□□□□□ -0.59
THBS3-210ENST00000541576 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
THBS3-210ENST00000541576 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
THBS3-210ENST00000541576 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
THBS3-210ENST00000541576 SULT6B1Q6IMI4 303 aa11.36□□□□□ -0.59
THBS3-210ENST00000541576 IP6K1Q92551 441 aa11.36□□□□□ -0.59
THBS3-210ENST00000541576 ARHGEF10O15013 1369 aa11.36□□□□□ -0.59
THBS3-210ENST00000541576 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
THBS3-210ENST00000541576 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
THBS3-210ENST00000541576 ARHGEF25Q86VW2 580 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 E9PSI1 815 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
THBS3-210ENST00000541576 RIPK4P57078 832 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
THBS3-210ENST00000541576 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
THBS3-210ENST00000541576 PHRF1Q9P1Y6 1649 aaKnown RBP11.34□□□□□ -0.59
THBS3-210ENST00000541576 LTV1Q96GA3 475 aaPredicted RBP11.34□□□□□ -0.59
THBS3-210ENST00000541576 EYA1Q99502 592 aa11.34□□□□□ -0.59
THBS3-210ENST00000541576 RCAN3Q9UKA8 241 aa11.34□□□□□ -0.59
THBS3-210ENST00000541576 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
THBS3-210ENST00000541576 NFE2L2Q16236 605 aa11.33□□□□□ -0.59
THBS3-210ENST00000541576 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.59
THBS3-210ENST00000541576 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
THBS3-210ENST00000541576 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
THBS3-210ENST00000541576 NHSL1Q5SYE7 1610 aa11.33□□□□□ -0.6
THBS3-210ENST00000541576 KDRP35968 1356 aa11.32□□□□□ -0.6
THBS3-210ENST00000541576 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
THBS3-210ENST00000541576 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
THBS3-210ENST00000541576 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
THBS3-210ENST00000541576 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
THBS3-210ENST00000541576 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
THBS3-210ENST00000541576 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
THBS3-210ENST00000541576 CRYBG1Q9Y4K1 1723 aa11.3□□□□□ -0.6
THBS3-210ENST00000541576 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
THBS3-210ENST00000541576 MYH16Q9H6N6 1097 aa11.3□□□□□ -0.6
THBS3-210ENST00000541576 IL16Q14005 1332 aa11.29□□□□□ -0.6
THBS3-210ENST00000541576 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
THBS3-210ENST00000541576 ANKRD24Q8TF21 1146 aa11.29□□□□□ -0.6
THBS3-210ENST00000541576 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 CPDO75976 1380 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
THBS3-210ENST00000541576 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 DLG5Q8TDM6 1919 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 KIAA0232Q92628 1395 aa11.28□□□□□ -0.6
THBS3-210ENST00000541576 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
THBS3-210ENST00000541576 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
THBS3-210ENST00000541576 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
THBS3-210ENST00000541576 ERBB3P21860 1342 aa11.27□□□□□ -0.61
THBS3-210ENST00000541576 TOM1O60784 492 aa11.27□□□□□ -0.61
THBS3-210ENST00000541576 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
THBS3-210ENST00000541576 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.61
THBS3-210ENST00000541576 ABCC6O95255 1503 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 PLIN1O60240 522 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
THBS3-210ENST00000541576 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 COL18A1P39060 1754 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
THBS3-210ENST00000541576 TSR2Q969E8 191 aaKnown RBP11.26□□□□□ -0.61
THBS3-210ENST00000541576 FAM83GA6ND36 823 aa11.25□□□□□ -0.61
THBS3-210ENST00000541576 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
THBS3-210ENST00000541576 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
THBS3-210ENST00000541576 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
THBS3-210ENST00000541576 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
THBS3-210ENST00000541576 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
THBS3-210ENST00000541576 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
THBS3-210ENST00000541576 GNAI1P63096 354 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms