RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SPATA32Q96LK8 384 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 CARD11Q9BXL7 1154 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 KDM5DQ9BY66 1539 aa7.6□□□□□ -1.19
LMO3-225ENST00000541295 CHGAP10645 457 aaKnown RBP7.59□□□□□ -1.19
LMO3-225ENST00000541295 MORC4Q8TE76 937 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 MKL1Q969V6 931 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 HDGFL1Q5TGJ6 251 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 CTR9Q6PD62 1173 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 SUGT1Q9Y2Z0 365 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 ZNF518AQ6AHZ1 1483 aa7.59□□□□□ -1.19
LMO3-225ENST00000541295 RHBDL3P58872 404 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 RTEL1-TNFRSF6BF6WH68 1400 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 UNC13BO14795 1591 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 TRIM6-TRIM34B2RNG4 842 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 TERF1P54274 439 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 NCAPGQ9BPX3 1015 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 TRIM34Q9BYJ4 488 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 ESPNB1AK53 854 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 KIF1CO43896 1103 aaKnown RBP7.58□□□□□ -1.2
LMO3-225ENST00000541295 IPO7O95373 1038 aaKnown RBP7.58□□□□□ -1.2
LMO3-225ENST00000541295 GTF2A1P52655 376 aaPredicted RBP7.58□□□□□ -1.2
LMO3-225ENST00000541295 ACRBPQ8NEB7 543 aa7.58□□□□□ -1.2
LMO3-225ENST00000541295 ZSCAN20P17040 1043 aaPredicted RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 UBA5Q9GZZ9 404 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 MAGEC2Q9UBF1 373 aaPredicted RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 STK24Q9Y6E0 443 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 POGZQ7Z3K3 1410 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 USP47Q96K76 1375 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 TSPOAP1O95153 1857 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 ERBB3P21860 1342 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 TPM3P06753 285 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 PPP1R1BQ9UD71 204 aaPredicted RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 DHX29Q7Z478 1369 aaKnown RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
LMO3-225ENST00000541295 INO80Q9ULG1 1556 aaPredicted RBP7.57□□□□□ -1.2
LMO3-225ENST00000541295 ROCK2O75116 1388 aaKnown RBP7.56□□□□□ -1.2
LMO3-225ENST00000541295 IQGAP3Q86VI3 1631 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 METTL14Q9HCE5 456 aaKnown RBP7.56□□□□□ -1.2
LMO3-225ENST00000541295 PLA2R1Q13018 1463 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 KDM4CQ9H3R0 1056 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 KIF3AQ9Y496 699 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 A2MP01023 1474 aa7.56□□□□□ -1.2
LMO3-225ENST00000541295 HSP90AB2PQ58FF8 381 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 SMC3Q9UQE7 1217 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 STK10O94804 968 aaKnown RBP7.55□□□□□ -1.2
LMO3-225ENST00000541295 DNAJC14Q6Y2X3 702 aaPredicted RBP7.55□□□□□ -1.2
LMO3-225ENST00000541295 HELBQ8NG08 1087 aaPredicted RBP7.55□□□□□ -1.2
LMO3-225ENST00000541295 KIDINS220Q9ULH0 1771 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 CTAGE5O15320 804 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 MLECQ14165 292 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 CT47A1Q5JQC4 288 aaPredicted RBP7.55□□□□□ -1.2
LMO3-225ENST00000541295 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
LMO3-225ENST00000541295 CFAP65Q6ZU64 1925 aaKnown RBP7.55□□□□□ -1.2
LMO3-225ENST00000541295 PAX3P23760 479 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 ZNF771Q7L3S4 317 aaPredicted RBP7.54□□□□□ -1.2
LMO3-225ENST00000541295 KNSTRNQ9Y448 316 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 SETSIPP0DME0 302 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 NEFHP12036 1026 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 NEXNQ0ZGT2 675 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 KIF7Q2M1P5 1343 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 CCDC7Q96M83 1385 aa7.54□□□□□ -1.2
LMO3-225ENST00000541295 CREB3O43889 395 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 ZBTB9Q96C00 473 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
LMO3-225ENST00000541295 MAGI2Q86UL8 1455 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 HECW2Q9P2P5 1572 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 NEO1Q92859 1461 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 KIF3CO14782 793 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 CCP110O43303 1012 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 PPFIA4O75335 1185 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
LMO3-225ENST00000541295 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
LMO3-225ENST00000541295 YEATS2Q9ULM3 1422 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 H0YHG0 523 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 SARNPP82979 210 aaKnown RBP7.53□□□□□ -1.2
LMO3-225ENST00000541295 BIRC2Q13490 618 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 SF3A1Q15459 793 aaKnown RBP7.53□□□□□ -1.2
LMO3-225ENST00000541295 CFAP53Q96M91 514 aa7.53□□□□□ -1.2
LMO3-225ENST00000541295 E9PCH4 1651 aa7.52□□□□□ -1.2
LMO3-225ENST00000541295 ATP10AO60312 1499 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 KCNA1Q09470 495 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 UGGT1Q9NYU2 1555 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 MAP4K4O95819 1239 aaPredicted RBP7.52□□□□□ -1.21
LMO3-225ENST00000541295 UVSSAQ2YD98 709 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 MFSD4BQ5TF39 518 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 RPGRIP1LQ68CZ1 1315 aa7.52□□□□□ -1.21
LMO3-225ENST00000541295 NUTM2DQ5VT03 806 aaPredicted RBP7.51□□□□□ -1.21
LMO3-225ENST00000541295 RALGAPBQ86X10 1494 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms